| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_15041 |
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| Symbol | dapF |
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| ID | 4777759 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1305222 |
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| End bp | 1306193 |
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| Gene Length | 972 bp |
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| Protein Length | 323 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 640087012 |
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| Product | diaminopimelate epimerase |
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| Protein accession | YP_001017513 |
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| Protein GI | 124023206 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0253] Diaminopimelate epimerase |
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| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.476128 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTGCAGT TCAGCAAATA TCAGGGTCTC GGCAACGACT TCGTCCTGAT TGATGGGCGT
GAGGGTCAGT TGTCTGATCA AGTGATCAAT CCTGATCCAG CCTGGGTACG AAAAATCTGT
GATCGACACT TCGGGATTGG AGCTGATGGG CTGATTCTTG CTTTACCACC TAGGGCTGAT
GGTGATCTGA GAATGCAAAT TTTCAATGCT GATGGCAGCC TGGCCGAGAT GTGTGGCAAT
GGCATCCGTT GCTTAACACG TTTCTTGGCT GATATCGACG GAGATTTGTG TGCTCAGCGG
TGGAACATAG AAACCCTAGC AGGAATAATT TGTCCAATCT TGCAGGAAGA TGGACAAATT
TGCGTAGATA TGGGATCTCC ATTCTTAGAC CCAGAATCGA TACCTACCAC CCTTACAATT
GGTTCTGCTG GATTGCCCCA GGGCGAGTGC CACTTGGGTG GTACATCATT GAATGTTGCA
GCTGTAGGAA TGGGTAATCC GCATGTGATC GTGCCTGTTG AAGATCTTGA AAGTATTCCA
TTTGAAAAAT GGGGGCAAAT ACTTGAAAAA CATCAGACCT TCCCAGCCAA AACAAATGTT
CATTTCCTGA AAATACACAG TACGAATCAA CTTGAAATTC GGGTTTGGGA ACGTGGGTCG
GGACCAACCC TGGCTTGTGG TACAGGAGCC TGTGCATCTC TTGTAGCAGC TTGTTTGCTT
GGTCTTTCTG ATGACCATGC GGAGGTTCTT TTACCTGGAG GTGTGTTACA GATCAGTTGG
CCAGGGCGTA GGGGTTCTGT TTTTATGACG GGGCCCGCTG AACCTGTTTT TGACGGGGTT
TTGACACCTC TTCTCACGCC AAGTCATACT GAGGTCTTAC CTCAAGATGA TCAGATCAAA
TTCGTTGAAG ACATCGAATA TTCTGGAAAC ATTAAAAGCT CTAGAATTAA TAAACACTCC
TATCTTGGAT AA
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| Protein sequence | MLQFSKYQGL GNDFVLIDGR EGQLSDQVIN PDPAWVRKIC DRHFGIGADG LILALPPRAD
GDLRMQIFNA DGSLAEMCGN GIRCLTRFLA DIDGDLCAQR WNIETLAGII CPILQEDGQI
CVDMGSPFLD PESIPTTLTI GSAGLPQGEC HLGGTSLNVA AVGMGNPHVI VPVEDLESIP
FEKWGQILEK HQTFPAKTNV HFLKIHSTNQ LEIRVWERGS GPTLACGTGA CASLVAACLL
GLSDDHAEVL LPGGVLQISW PGRRGSVFMT GPAEPVFDGV LTPLLTPSHT EVLPQDDQIK
FVEDIEYSGN IKSSRINKHS YLG
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