| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14811 |
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| Symbol | trmA |
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| ID | 4776790 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 1277157 |
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| End bp | 1278554 |
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| Gene Length | 1398 bp |
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| Protein Length | 465 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 640086991 |
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| Product | SAM-dependent methyltransferase |
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| Protein accession | YP_001017492 |
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| Protein GI | 124023185 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG2265] SAM-dependent methyltransferases related to tRNA (uracil-5-)-methyltransferase |
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| TIGRFAM ID | [TIGR00479] 23S rRNA (uracil-5-)-methyltransferase RumA |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.0686712 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTAGCT CTACAAACTC AAGTTTGACA TCAACACCAA CCCCAGGTGA TAAGGTTGAG
ATCACATGCG TAGATTTAGA TCGTCATGGT AATGGACTGG CGCGATGGAA CAATTGGGTT
GTGATAGTCA ATGACCTTCT GCCTGGTGAA CGAGCACAAA TAGAGTTTGT GAGACGCCAT
CGAAACCAGT TTTTAGCCCG AAAGGTTCAT TCAATTGAGA CAGTTTCAAG TCGCAGACAG
CCCCCATGCA AAATCGCCAA AGAATGTGGA GGTTGCTCAA TACAGCACCT TAATGATCAT
GGACAGAGCT TATTAAAGCA AAGTCATCTA CGGGAAATAC TTCTACGTTT AGGTCAATTG
GATAATAAAA TAGAACCAAT AATGACTGAT TATACTAGAG CTCTCGGATA TCGAAATAGA
GCCTTAATTC CCCTTTATCG CAATAGAGAA GGACAGTTAC TTATGGGTTA TTACCGACGC
GGCAGTCACC AAATTATTGA TCTCAATCGA TGTCCGGTAC TGGACCGAGG AATCGATCAA
TATCTGGCTT GGATCAAAGA TGATCTTCAA CAGCAGAATT GGCCGGCAGA TTCAGACCTA
TCTTCTGGCG AAGGAGTCCG TCATCTAGGC ATTCGTATTG GCCAAAAAAC AAGACAAGTG
CTGATCACAC TGGTAAGTAG TACCACTGAA CTCTCTGGCC TACATCAACA AGCCAACGAC
TGGTATAGGC GTTGGCCGGA AGTAAAAGGA ATAACTTTAA ACATCCAACG ACAGAGAAAC
AATCTTGTTC TTGGTCAAGA AACTATATTG CTTGCTGGTG ATCTTGATAT TGAGGAGCAT
TTTTGTAATC TCTCCTTATT GCTTTCTACC ACAACATTTT TTCAAGTGAA CACTATTCAG
GCAGAACGGA TAGTCTTAAA ATTACTTAAA TGGCTATCCA CTACCTTGCC TGACATCAAT
ATAATTGACG CATATTGTGG AATTGGCACA ATTTCTCTCC CCATCGCAGC AGCTGGATAT
CACGTAATAG GTCTTGAACT TCATGCAGAA GCTATTGCTC AAGCAAATAA AAATGCCTTG
CGGAATAATC TGGGTAATGC TTCGTTTTTG TGTGGTGATG TTTCCTTGTT ACTGGCCAAA
ATACTTCAAC ATCATGATGT GCTAGTGCTG GATCCACCGC GTAAAGGTTT AGATCAAATG
GTGATTAAAA CAATCCTTTC AGTTCGACCA GAGAGAGTGG CATATCTTAG TTGTGACCCT
GCCACATTGG CTCGTGACCT CAAGCAATTG ATAGTCCCAA ATGGACCCTA TCAGATTGAT
CAATTACAAC CAATTGATTT CTTCCCACAA ACAATGCATA TCGAATGTCT GGCACTGTTA
ATTCGTATTA GCTCCTGA
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| Protein sequence | MTSSTNSSLT STPTPGDKVE ITCVDLDRHG NGLARWNNWV VIVNDLLPGE RAQIEFVRRH
RNQFLARKVH SIETVSSRRQ PPCKIAKECG GCSIQHLNDH GQSLLKQSHL REILLRLGQL
DNKIEPIMTD YTRALGYRNR ALIPLYRNRE GQLLMGYYRR GSHQIIDLNR CPVLDRGIDQ
YLAWIKDDLQ QQNWPADSDL SSGEGVRHLG IRIGQKTRQV LITLVSSTTE LSGLHQQAND
WYRRWPEVKG ITLNIQRQRN NLVLGQETIL LAGDLDIEEH FCNLSLLLST TTFFQVNTIQ
AERIVLKLLK WLSTTLPDIN IIDAYCGIGT ISLPIAAAGY HVIGLELHAE AIAQANKNAL
RNNLGNASFL CGDVSLLLAK ILQHHDVLVL DPPRKGLDQM VIKTILSVRP ERVAYLSCDP
ATLARDLKQL IVPNGPYQID QLQPIDFFPQ TMHIECLALL IRISS
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