| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_14591 |
|---|
| Symbol | |
|---|
| ID | 4777616 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 1253618 |
|---|
| End bp | 1255477 |
|---|
| Gene Length | 1860 bp |
|---|
| Protein Length | 619 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 51% |
|---|
| IMG OID | 640086968 |
|---|
| Product | cell division protein FtsH4 |
|---|
| Protein accession | YP_001017470 |
|---|
| Protein GI | 124023163 |
|---|
| COG category | [O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0465] ATP-dependent Zn proteases |
|---|
| TIGRFAM ID | [TIGR01241] ATP-dependent metalloprotease FtsH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.584936 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGTTCAG GTCCATCGGC ACTCCAGGGG TCGCCATCTC TGAAGCGTTC AACTCTGGAA
GCAGATCAGT CTCAGCATTC ATCTGAAGCT GTATCCTTTG CTCCCTTCAA GCAGAAACCC
TCAATCAGCT ATAGCCAGCT GCTCAATCAG ATCAAAGAGA AAAAGGTTAA GTCGTTGGAG
TTGATACCAG CACGGCGAGA AGTCGTGGTG GTTTTCAAGG ATGGACACCA GGAGAAGGTG
GCGATCTTCG ATAATTACCA ACAAATCCTA CGAGTTGCCG AGGCTGCTGA TACCTCTCTG
ACGGTGAAGG ACATTCGTCA GGAACAGGCA TTTGCAGGAA TGGCCGGCAA TCTTGTATTG
ATCTTGATGG TTGTTGTTGG CTTGACGTTC CTTTTTCGTC GTTCTGCTCA AGTCGCAAAC
AGAGCAATGG GATTTGGACG CAGTCAACCT CGGTTGAAAC CGCAAGAGGA TCTACCTATT
CGCTTTGATG ATGTAGCGGG GATTACAGAA GCGAAAGAGG AGCTGCAAGA GGTGGTTACT
TTCTTGCGGC AACCTGAGAG CTTCATCAAG CTTGGCGCCC TTATCCCAAG GGGTGTTCTT
CTAGTGGGTG CTCCTGGAAC AGGGAAAACC CTCTTGGCCA AAGCAATTGC TGGTGAGGCA
GACGTTCCTT TTTTCTCTAT GGCCGCCTCT GAATTTGTGG AATTATTTGT TGGCGTGGGC
GCTAGTCGTG TAAGGGACCT ATTCCGCAAA GCTAAAGAGA AAGCCCCGTG CATCGTGTTT
ATAGATGAAA TTGATGCTGT GGGGCGACAG CGAGGGGCTG GGATCGGTGG TGGAAATGAC
GAACGAGAAC AGACTCTTAA TCAGCTTCTG ACAGAAATGG ATGGGTTTGC AGATAATTCT
GGCGTCATTC TTCTGGCAGC TACCAATCGG CCAGATGTGC TTGATGCTGC ACTGATGCGG
CCTGGACGCT TTGATCGTCG TATTGAAGTT TCCCTTCCTG ATCGTCGGGG CCGTAAGGAA
ATCCTGGCTG TTCATGCTCG AACTCGACCC CTTGCTGAGG AGGTGTGTTT GCAGGATTGG
GCACGTCGAA CACCTGGTTT CTCAGGGGCT GATCTTGCCA ACTTATTGAA CGAAGCTGCC
ATCCTCACAG CAAGGCAGGA GAAAGCATCG ATTGGCACTG AACAGCTTGA AGCGGCGCTT
GAAAGGATCA CGATGGGACT CTCTGCAGCA CCTCTACAAG ACAGTGCAAA AAAGAGGTTG
ATTGCCTATC ACGAGATTGG ACATGCCCTG GTTGCAGCTT TAACCCCTCA TGCCGACCGT
ATTGATAAGG TCACACTTTT GCCCCGTAGC GGAGGCGTTG GCGGATTTAC TCGTTTCTGG
CCAGATGAGG AAATCCTTGA TTCAGGTTTG GTCACAAAGG GATATCTCTT CGCAAGGCTT
GTGGTTGCCC TTGGCGGCCG GGCAGCAGAG TTGGTGGTTT TTGGACTCGA TGAAATCACC
CAGGGTGCAA GTGGCGACTT GCAGAGCGTT GCGCATCTGG CTCGAGAGAT GGTGACGCGG
TTCGGATTTT CGAGCCTTGG GCCTATCGCT TTGGAGACAG AGGGTTCAGA GGTTTTCCTA
GGACGTGATT TGATCCATAC ACGCCCGAGC TACGCGGAAT CGACTGGCAA AGTCATAGAC
GAGCAGATAC GAGCTTTAGC GGTTGAAGCC TTAGAGCAGG CAATTAACTT GCTTTCGCCA
AGAAGGGAAG TGATGGATCT GTTGGTTGAT GCTCTGATTC AGGAGGAAAC TCTCCATACT
GATCGGTTTC TGCAATTGGC TGGATTGACT GTTGATCAGT CACAGCCAGT GGGCGTGTAA
|
|---|
| Protein sequence | MSSGPSALQG SPSLKRSTLE ADQSQHSSEA VSFAPFKQKP SISYSQLLNQ IKEKKVKSLE
LIPARREVVV VFKDGHQEKV AIFDNYQQIL RVAEAADTSL TVKDIRQEQA FAGMAGNLVL
ILMVVVGLTF LFRRSAQVAN RAMGFGRSQP RLKPQEDLPI RFDDVAGITE AKEELQEVVT
FLRQPESFIK LGALIPRGVL LVGAPGTGKT LLAKAIAGEA DVPFFSMAAS EFVELFVGVG
ASRVRDLFRK AKEKAPCIVF IDEIDAVGRQ RGAGIGGGND EREQTLNQLL TEMDGFADNS
GVILLAATNR PDVLDAALMR PGRFDRRIEV SLPDRRGRKE ILAVHARTRP LAEEVCLQDW
ARRTPGFSGA DLANLLNEAA ILTARQEKAS IGTEQLEAAL ERITMGLSAA PLQDSAKKRL
IAYHEIGHAL VAALTPHADR IDKVTLLPRS GGVGGFTRFW PDEEILDSGL VTKGYLFARL
VVALGGRAAE LVVFGLDEIT QGASGDLQSV AHLAREMVTR FGFSSLGPIA LETEGSEVFL
GRDLIHTRPS YAESTGKVID EQIRALAVEA LEQAINLLSP RREVMDLLVD ALIQEETLHT
DRFLQLAGLT VDQSQPVGV
|
|---|
| |