| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_13931 |
|---|
| Symbol | chlH |
|---|
| ID | 4776522 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 1188517 |
|---|
| End bp | 1192560 |
|---|
| Gene Length | 4044 bp |
|---|
| Protein Length | 1347 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 640086902 |
|---|
| Product | magnesium chelatase subunit H |
|---|
| Protein accession | YP_001017405 |
|---|
| Protein GI | 124023098 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG1429] Cobalamin biosynthesis protein CobN and related Mg-chelatases |
|---|
| TIGRFAM ID | [TIGR02025] magnesium chelatase, H subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.0983258 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTCACGC AGGTTCGCTC AGCCGATCGC CGAGTTGCTC CTGCTGAGAA CCACAGCCAT
CAAGCTGTCA TGAAAGCGGT GTATTTGGTA CTCGAACCTC AGTACCAAAG TGCGCTTTCC
CAGGCCGCAA ACAGCCTCAA TGCACAAAAT GGAGCCATTG GCGTTGAACT GAGTGGTTAC
CTCATCGAAG AACTGCGCGA TCCAAGCAAC TTTGCAGACT TCCAAGCCGA TGTAGCCGAA
GCCGATGTTT TTATCGCCTC GCTGATTTTC ATTGAAGACC TAGCTCAGAA AGTGGTGGAC
GCTGTCACAC CCCATCGCGA GCGGCTCAAA GCCATTGTTG TTTTTCCTTC CATGCCGGAG
GTGATGCGGC TCAACAAGCT TGGCACCTTC ACCATGGCCC AGCTGGGACA GAGCGATAGT
GTTATCGCCA ACTTCATGAA AAAGCGAAAG GAATCAAGCG GTGCTGGATT CCAAGACGCA
ATGCTCAAAC TATTAAATAC ACTCCCCAAC GTTCTTAAAT ATCTGCCGGT TGATAAAGCA
CAAGATGCAA GAAGCTTCGT GCTCAGCTTT CAATACTGGC TAGGAGGTAC GCCAGACAAC
CTGCGCAACT TCCTATTAAT GCTGGCGGAT AAGTATGTCT TTCCAGCGAC AGAAGGGGAA
GATCGTCCAA AACTAGACAT CGTGGAGCCA GAGATCTTCC CGGACCTGGG CATCTGGCAT
CCGATGGCCC CTTCGATGTT TGAAGATCTC AAGGAATACC TCAACTGGAC GACCAGCCGC
ACGGATCTCT CAGAAGAAGC CCGCAAAGGC CCAATGATCG GTCTTGTCCT GCAGCGAAGC
CACATCGTCA CTGGTGACGA TGCCCACTAT GTCGCTGTCA TTCAGGAACT CGAGTTCCGT
GGTGCACGTG TCCTCCCAAT TTTCTGTGGT GGGCTTGACT TCTCTAAGCC TGTCAATGCT
TTCTTTTTCG ACCCAATTAA CCCTGACCAA CCCCTAGTCG ATGGGGTGGT TTCCCTGACT
GGATTTGCCC TTGTGGGTGG CCCTGCCAGA CAGGATCACC CCAAGGCTAT CGAATCTCTC
AAGCGCCTTA GCCGCCCTTA TATGGTGGCG CTCCCGCTTG TCTTCCAAAC AACTCAGGAA
TGGGAAGTTA GTGACTTAGG CCTGCATCCA GTTCAGGTTG CACTACAAAT CGCCATCCCA
GAATTAGACG GAGCCATCGA GCCAATCGTG CTCTCTGGTA GGGATGATGC CACCGGCAAA
GCCCACACAC TTCAAGACCG GGTTGATGCG ATTGCTGAAC GAGCAATCCG TTGGTCATCT
CTAAGAATCA AGTCAAGAGC TGAGAAAAAG TTAGCAATTA CTATTTTTAG TTTCCCTCCA
GATAAAGGGA ATGTTGGGAG TGCTGCCTAC CTCGATGTTT TTGGTTCCAT CCATCGTGTT
TTGGAGGAAA TGAAGGCTCA GGGCTACGAC ATCCAAAACC TCCCCAAAGA CTCCAAAGCA
CTGATGGAGG TGGTAATCAA TGATCCTGAA GCACTAGAAG GAGCACCAGA ACTGGCCATT
GCACACCGTA TGAGTGTGGC TGAGTACGAG CACCTGACAC CTTATTCAGA GCGCCTTGAA
GAAAACTGGG GCAAGCCGCC AGGAGAACTC AATAGTGATG GTCAAAACCT ACTGATCTAT
GGACGTCACT TCGGCAACGT CTTTGTAGGC GTTCAACCCA CCTTCGGCTA CGAAGGAGAC
CCAATGCGCT TGCTCTACTC AAGAAGCGCC AGTCCTCATC ACGGCTTTGC TGCTTACTAC
ACCTATCTCG AAAAAATCTG GAAAGCTGAT GCTGTGCTCC ATTTTGGCAC CCACGGCTCT
CTCGAATTCA TGCCAGGGAA GCAGATGGGC ATGAGTGAAA CCTGCTATCC AGATTCATTG
ATCGGAGGGC TGCCAAATCT TTATTACTAC GCAGCGAACA ATCCCTCCGA AGCAACGATT
GCAAAAAGGC GTGGTTATGC CTCCACAATC AGCTACCTCA CTCCTCCAGC AGAAAATGCA
GGCCTCTATA AAGGCCTCAA AGAACTGGGC GAACTGGTGG GGTCCTACCA GCAACTGCGT
GAAGGCGGTC GTGGTGTGCA AATCGTCAAT ACCATCATTG AAACCGCACG CCAATGCAAT
CTTGATCGCG ACGTAGACCT ACCAGAACAA GACTCGGCAG AGCTAGATCT CGACCAACGG
GATGCCGTTG TAGGCGCGGT GTATAGCCAA TTGATGGAAA TCGAGAGTCG CCTTCTTCCA
TGTGGACTTC ACACGATCGG CAAACCACCC ACGGCAGAAG AAGCGATAGC AACTCTGGTA
AGCATCGCCG CACTTGAACG TGAAGACGAT GGTCTTCGTT CGCTTCCTGG GCTGTTAGCA
GAAGCGATAG ATCGCAAAAT AGAAGATATC TACAAAGGAA ATGATGACGG CATTCTTGCT
GATGTAGAGC TCAATCGCAC TATCACTGAG GCATCTCGTG TCGCCGTTAG AGCGATGGTG
CAATCTCTCA CGGGACGAGA CGGACGCGTC AATATGAAAG ATAATTCCAA TTGGTATTTG
GAATGGTTTT TTAATCTACT TCAGCGTTTT GGTGTAACAC GCCCAAATGC ATGGTTGCAA
GCCTGTAGCA AAGCTGGATT CGATAAAATT GATTCCATTG AGCTTGACAA ACTGTTTGCT
TATTTGCGCG GTTGCCTTGA AAAGATATGC GCAGATATGG AAATGCAAAG CCTCATTCGC
GCCCTCGATG GAGAATATGT GCTTCCCGGT CCAGGTGGAG ACCCAATTAG GAATCCAGGG
GTTCTGCCAA GTGGCAAAAA CATTCATGCT CTCGATCCAC AGGCCATCCC TACCAGAGCT
GCCGTTGCTG CAGCAAAAGG AGTCGTCGAT AAATTAATTG AACGTCAACG CCAAGAACAG
GGCGATTGGC CAGAAACAAT TGCCTGTGTT CTTTGGGGTA CAGATAACAT TAAAACCTAC
GGTGAATCAC TGGCGCAAAT TCTCTGGTTT ATTGGTGTAA ATCCAGTACC AGACTCTGTA
GGTCGTGTTA ACAAATTAAA ACTCATTCCC CTTGAAGAGC TTGGTCGACC AAGGATTGAT
GTGGTCGTGA ACTGTTCAGG AGTATTTCGA GATCTGTTTA TCAACCAAAT GGCATTAATC
GATCAAGGCG TCAAGATGGC AGCTGAGGCC GATGAACCAC TGGATCAAAA CTTCGTACGC
AAACACTCCC TTGAACAAGC AAAGGCACAA GGCACAAGCC TTAGGGATGC AGCCTGCCGT
GTATTTTCCA ATTCAAGTGG AAGTTATAGC TCAAACGTAA ATCTTGCAGT TGAGAACTCA
ACATGGGAAG AAGAGAATGA ACTTCAAGAG ATGTATCTTT CACGCAAGAC ATTTGCCTTT
AATGCTGACA ACCCAGGAGA GATGAACCAA AACAGAGAAG TATTTGAATC TGTCATGAAA
ACAGCAGATG TCACATTCCA AAATCTTGAT TCTGCTGAAA TTTCGCTTAC TGATGTCAGC
CACTACTTCG ACTCAGACCC CACAAATTTA ATCAAGGGTC TTAGAGATGA TGGCAAAGCT
CCAACGAGTT ACATCGCAGA TACAACAACA GCAAATGCGC AGGTCCGCTC TCTGAGCGAG
ACGATTCGAT TGGATTCCCG TACAAAGTTA CTCAATCCAA AATGGTATGA AGGCATGGTC
AACTCAGGCT ATGAAGGCGT TCGCGAAGTC GCCAAGCGCC TGAACTTTAC CCTCGGCTGG
AGCGCAACTA GCGGACAGGT AGATAACTTT GTCTACGAAG AGTCAAACGA AACCTTCATC
AATGATCCAG AGATGCGTAA GCGTCTCATG GAACTTAATC CACATAGTTT CCGTCGTATT
GTTGGTACCC TCTTAGAAGT CAATGGCAGA GGATATTGGG AAACATCTGA TGAGAACATC
CAGCAATTGC AAGAGCTTTA CCAGGAAATA GAAGATCGAA TTGAAGGAGT AACAACTCCA
GACAACCAAT CATCTGGCGA ATGA
|
|---|
| Protein sequence | MFTQVRSADR RVAPAENHSH QAVMKAVYLV LEPQYQSALS QAANSLNAQN GAIGVELSGY
LIEELRDPSN FADFQADVAE ADVFIASLIF IEDLAQKVVD AVTPHRERLK AIVVFPSMPE
VMRLNKLGTF TMAQLGQSDS VIANFMKKRK ESSGAGFQDA MLKLLNTLPN VLKYLPVDKA
QDARSFVLSF QYWLGGTPDN LRNFLLMLAD KYVFPATEGE DRPKLDIVEP EIFPDLGIWH
PMAPSMFEDL KEYLNWTTSR TDLSEEARKG PMIGLVLQRS HIVTGDDAHY VAVIQELEFR
GARVLPIFCG GLDFSKPVNA FFFDPINPDQ PLVDGVVSLT GFALVGGPAR QDHPKAIESL
KRLSRPYMVA LPLVFQTTQE WEVSDLGLHP VQVALQIAIP ELDGAIEPIV LSGRDDATGK
AHTLQDRVDA IAERAIRWSS LRIKSRAEKK LAITIFSFPP DKGNVGSAAY LDVFGSIHRV
LEEMKAQGYD IQNLPKDSKA LMEVVINDPE ALEGAPELAI AHRMSVAEYE HLTPYSERLE
ENWGKPPGEL NSDGQNLLIY GRHFGNVFVG VQPTFGYEGD PMRLLYSRSA SPHHGFAAYY
TYLEKIWKAD AVLHFGTHGS LEFMPGKQMG MSETCYPDSL IGGLPNLYYY AANNPSEATI
AKRRGYASTI SYLTPPAENA GLYKGLKELG ELVGSYQQLR EGGRGVQIVN TIIETARQCN
LDRDVDLPEQ DSAELDLDQR DAVVGAVYSQ LMEIESRLLP CGLHTIGKPP TAEEAIATLV
SIAALEREDD GLRSLPGLLA EAIDRKIEDI YKGNDDGILA DVELNRTITE ASRVAVRAMV
QSLTGRDGRV NMKDNSNWYL EWFFNLLQRF GVTRPNAWLQ ACSKAGFDKI DSIELDKLFA
YLRGCLEKIC ADMEMQSLIR ALDGEYVLPG PGGDPIRNPG VLPSGKNIHA LDPQAIPTRA
AVAAAKGVVD KLIERQRQEQ GDWPETIACV LWGTDNIKTY GESLAQILWF IGVNPVPDSV
GRVNKLKLIP LEELGRPRID VVVNCSGVFR DLFINQMALI DQGVKMAAEA DEPLDQNFVR
KHSLEQAKAQ GTSLRDAACR VFSNSSGSYS SNVNLAVENS TWEEENELQE MYLSRKTFAF
NADNPGEMNQ NREVFESVMK TADVTFQNLD SAEISLTDVS HYFDSDPTNL IKGLRDDGKA
PTSYIADTTT ANAQVRSLSE TIRLDSRTKL LNPKWYEGMV NSGYEGVREV AKRLNFTLGW
SATSGQVDNF VYEESNETFI NDPEMRKRLM ELNPHSFRRI VGTLLEVNGR GYWETSDENI
QQLQELYQEI EDRIEGVTTP DNQSSGE
|
|---|
| |