Gene P9303_13211 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_13211 
Symbol 
ID4777646 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1128520 
End bp1129587 
Gene Length1068 bp 
Protein Length355 aa 
Translation table11 
GC content51% 
IMG OID640086829 
Producttransglycosylase SLT domain-containing protein 
Protein accessionYP_001017333 
Protein GI124023026 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2951] Membrane-bound lytic murein transglycosylase B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.26412 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACGGCA GCGTAAGCGG CGGCGGGCTG ATCAGTGCCA TCGAGCCTTT GTTGGTTCGT 
TCCGGTAGCG TCATCTTTGC TTTTGAGTTG GTTGTCATGG GGAAACGCCA CCTCGCTCTA
ATGCTTTTCA GCGCTGGGGT TTTAAGCCTC ATGGGTAGCT TGGCTTTGAA GTCACTCAGT
ACCACCAATG TTTTTGTGGC GGAACGCCAA TCCGCATCAA AAAGTCCGAT TCTGCCAAGC
GATGCCGATC GGCCACGTAT GGCTGATGGG CGTCATTACC CCATCGTTCC AGATGATCCG
ATCAAGCTTG CGGATCTTCT TCAAGAAGTA GAAGAAGCGC TGCTTCAACC ATCAACACCT
GAAGAAGATC TACCAAGCCT TGGCCATCAA CAACAGCTCA TCTACCGGGT GTTGTCTAAG
GATCTACCCA CTTCTAATAA GGTGCTGGCT CACTTGCCGA GCCGTTGGCG TCATGTGGCT
GAACGCCATT TAGCCGCAAG GCGTGAGTTT CTTGCGATGC ACAGGAGATC CTTTACTCCT
CGCTTAATGC CGGCCTGGAG AATCATTCCA CCCGAGCCTG CAGAGAAGTT ATTGAGCTAT
TACCGCAAAG CAGAACGTTC AACGGGTATC GATTGGGAAG TTTTAGCGGC GGTGAACCTT
GTTGAAACAG GAATGGGCCG CATCGATGGT GTCTCTGTAG CTAATGCGCA AGGACCGATG
CAGTTCTTGC CAACAACTTG GCAAGAGAAT GGTATTGGAG AAGGTGACAT CCGTGACCCC
CATGACGCGA TTCAGGCAGC CGCTCGCTAT CTAGTACGCC GCGGCGGGCT GCAAGATATC
CGTAAAGGGT TGTGGGGATA TAACAATAGC GACCATTACG GAAGGGCCGT GCTCGAATAC
ACAGCCTTAT TGAAGGAAGA TCCGCGCGCA TTCACTGGAC TTTATCATTG GGAAATTCAC
TTTGACATTG ATGCTGGGGA TTTATGGCTG CCTGTTGGTT ATAATCAAAA CAAGCCAATT
CCTGTGTCTA GCTATTTAAG GAAGTTTCCA GCAAGTAGCC CAAGATAA
 
Protein sequence
MDGSVSGGGL ISAIEPLLVR SGSVIFAFEL VVMGKRHLAL MLFSAGVLSL MGSLALKSLS 
TTNVFVAERQ SASKSPILPS DADRPRMADG RHYPIVPDDP IKLADLLQEV EEALLQPSTP
EEDLPSLGHQ QQLIYRVLSK DLPTSNKVLA HLPSRWRHVA ERHLAARREF LAMHRRSFTP
RLMPAWRIIP PEPAEKLLSY YRKAERSTGI DWEVLAAVNL VETGMGRIDG VSVANAQGPM
QFLPTTWQEN GIGEGDIRDP HDAIQAAARY LVRRGGLQDI RKGLWGYNNS DHYGRAVLEY
TALLKEDPRA FTGLYHWEIH FDIDAGDLWL PVGYNQNKPI PVSSYLRKFP ASSPR