Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_13031 |
Symbol | |
ID | 4778362 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 1113981 |
End bp | 1114901 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 42% |
IMG OID | 640086811 |
Product | TPR repeat-containing protein |
Protein accession | YP_001017315 |
Protein GI | 124023008 |
COG category | [R] General function prediction only |
COG ID | [COG4785] Lipoprotein NlpI, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0823406 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCCACTG GTGTGGTGCT TCTTTCAACC CAGGCAGCAG ATGCTCAAAG TGCTGTTTTC TACAAAAAGA GCGGTAATGC AAAGGTTAGA TCAGAAGATT ATCAAGGAGC AATTGCTGAT TACAGCAAGG CAATTGCAAT TAATCCAAAG GATGCCGATG CATACAATAA CCGTGGTCTT GCCAAGAGTA AGTCAGGAGA TAATCAAGGA GCAATTGCTG ATTTCAACAA GGCAATAGAG ATTAATCCGC AGGATGCCCG TGCTTATAAC AACCGTGGTC TTGCCAAGAG TAAGTTAGGC GATTATCAAG GGGCAATTGC TGATTACAAT AGGGCAATAG AAATTAATCC GGTGTATTTA TATGGATTTC TCAATCGTGG TCTTGCCAAG AAAAATCTCA ACAAATATCA AGAAGCAATT GCTGATTACA ACAATGCAAT TGCAATCAAC CCTCAACTTG CTGCTGCCTA CAACAAGCGT GGTCTTGCAA AGGTTGATTT AAAGGATTAT CAAGGGGCTA TTGCTGATTA CAACAAGGCA ATCGCAATTA ATCCCAAGGA TGCCGCTGCC TACAACAACC GAGGGGCTGT TAAGGGTAAA TCAGGAGATA ATCAAGGAGC AGTTGCTGAT TTCAATAAGG CAATTGAGAT TGATCTGCAA TATGCCGATG CCTACATCAA CCGTGGCCTT ACACAGTATA ATTTAGGAGA TAATCAAGGA GCAATTGCTG ATTACAGCGA GGCAATACAG ATTGATCCGC AGGATGTCTT CGCCTATAAC AATCGTGGTT ATGCCACGTG GAAATTAAAA GATTATCAAA GTGCTTGTAA TGACTTCAAG AAAGCAGCAT CTCTTGGAAG TCAATCAACA GCACAATGGT TAAACAAAGA AGATGGTGCC TGGTGCCGCA ATATGCGATG A
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Protein sequence | MATGVVLLST QAADAQSAVF YKKSGNAKVR SEDYQGAIAD YSKAIAINPK DADAYNNRGL AKSKSGDNQG AIADFNKAIE INPQDARAYN NRGLAKSKLG DYQGAIADYN RAIEINPVYL YGFLNRGLAK KNLNKYQEAI ADYNNAIAIN PQLAAAYNKR GLAKVDLKDY QGAIADYNKA IAINPKDAAA YNNRGAVKGK SGDNQGAVAD FNKAIEIDLQ YADAYINRGL TQYNLGDNQG AIADYSEAIQ IDPQDVFAYN NRGYATWKLK DYQSACNDFK KAASLGSQST AQWLNKEDGA WCRNMR
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