Gene P9303_12151 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_12151 
Symbol 
ID4777741 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1057899 
End bp1058948 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content51% 
IMG OID640086724 
ProductABC transporter for amino acids, substrate binding protein 
Protein accessionYP_001017229 
Protein GI124022922 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGGC GTTTTGCCAC AGGTCTAGTC ACTCTGTCTT TGCTTGCCAC AGGATGTGCC 
TCAATTGATC AAGGTGGTGG TTCTCGGCTG GAATTGATCA GCAAGCGCGG CCAATTGCAT
TGTGGTGTTA GCGGCAAGAT CCCAGGCTTT AGTTTTCTAC TTGGCAATGG TCGCTATGAA
GGGCTAGACG TTGATATCTG CCGCGCTATG GCCGCTGCAG TTGTTGGCGA TGCCACGAAA
GTGCAATATC GACCTCTTAC AGCTCCCGAA CGCTTCACTG CTCTAAAAAC AGGCGAAATT
GATCTGCTTT CACGTAACAC CACATTGAAT CTCAGTCGGG ATGCAGCAGG AGGCAATGGT
CTCACCTTTG CACCTGTGGT GTTTCACGAT GGCCAGGGGT TGATGGTCAA GCGAAGTACC
GGAATTAAGG GCCTTCAGGA TTTGAAAGCC AGCAACATCT GTGTGGGCTC AGGCACCACG
ACGGAACAGA ACCTCAACGA TGCATTTCAG GAACGAAAGC TTTCTTATAC GCCGATTAAG
TATCAAGATC TCAATCAAGT TGTCGCCGGT TACCTCCAGG GTCGATGTCT AGCGATGACT
TCCGATCGTT CTCAACTTGC GGCGGCTCGA TCTGGTTTTC CTGATCCTGA GCAGCACATC
ATTCTTGATG TTGTGCTGAG TAAGGAACCG CTTGCCCCTG CCTCAGTAGG TGGAGACCAG
CGTCTTGGTG ATGCCATCCG ATGGGTGGTC TTTGCTCTTT TTGCCGCTGA GGAATTTGGT
ATTACTCAAG AGAATGTCGA CAGCAAGCTT CAACAAGCCA AGACAAACCC ACAGATGTCA
TCGCTGCGAC GCTTTCTAGG CGTTGATGCT GGCCTTGGTC AAAAGCTTGG TCTGGCAGAT
GACTTCGTCG TCAAGGTGAT CCGAGCCACA GGCAATTATG GAGAGATCTA CAACCGCCAC
CTCGGTCCAA ACAGTTCTGT GCCAATTCCT AGAGGTCTAA ATCGCTCCTA TCGGCAAGGT
GGCTTACTGA TCGCGCCACC ATTTAACTAA
 
Protein sequence
MIRRFATGLV TLSLLATGCA SIDQGGGSRL ELISKRGQLH CGVSGKIPGF SFLLGNGRYE 
GLDVDICRAM AAAVVGDATK VQYRPLTAPE RFTALKTGEI DLLSRNTTLN LSRDAAGGNG
LTFAPVVFHD GQGLMVKRST GIKGLQDLKA SNICVGSGTT TEQNLNDAFQ ERKLSYTPIK
YQDLNQVVAG YLQGRCLAMT SDRSQLAAAR SGFPDPEQHI ILDVVLSKEP LAPASVGGDQ
RLGDAIRWVV FALFAAEEFG ITQENVDSKL QQAKTNPQMS SLRRFLGVDA GLGQKLGLAD
DFVVKVIRAT GNYGEIYNRH LGPNSSVPIP RGLNRSYRQG GLLIAPPFN