Gene P9303_12141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_12141 
Symbol 
ID4777783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp1056999 
End bp1057892 
Gene Length894 bp 
Protein Length297 aa 
Translation table11 
GC content50% 
IMG OID640086723 
ProductABC transporter for amino acids, membrane component 
Protein accessionYP_001017228 
Protein GI124022921 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4597] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCGCT CGCAGCACTT TTGCTTGCAA GTTGGCGTCG CTCTCGCTCT GCTGACCATT 
CTTGGCGTGT TGATCAACAA TCTCGCTGTG AATCTGATCC GCACGGACAT GGGGCTCAGC
TTTCTTTGGT TAGGACGACC TGCAGGCTTT GCTCTAGCTG AACATCCGCT GTCTTATAGG
CCTTCGGATA GTTATGCCTG GGCTCTTTGC ATGGGCTGGT TAAACAGCCT CAAGGTCATC
CTTTGCGGCC TTGTTCTGGC CACGGTGATT GGAGTGCTTG CAGGGGCTGC CAGAAGTAGC
AGCAATCTGC TGTTACGAGC ACTGTCGAGC GGATATGTGG CCTTGATCCG GCAGATCCCT
CTGTTGCTAC AGCTGTTGTT CTGGTATTTC GTTGCTTTCT TAAGCCTTTC TGGGACCCCC
TTGGCGCCAT TAGGAGCCTT GATACGTGTC TCGAACCAAG GGATCGAATT GCTTGGCCTA
AATCTGAGCG TTGAATTTTC GGCTTTATTA GTGGGCCTAA GCATCTTCAC AGCAGCATCG
ATTGCTGAAA TTGTCCGCGG TGGATTGAAT TCTGTTCCGA GTGGTCAATG GGAAGCGTTT
CGCAGTCTTG GTTTGCCAGA AGGTTTTGGG TTACGTCGGG TGGTGTTACC TCAAGCTTTA
CCAGCCATCC TGCCTGGCCT AACAAGCCAA TATCTCAACT TGGCCAAAAA CAGCACATTG
GCAATCGCCG TAGGTTATGC CGATGTCTAT GCGGTAAGTG ATACGACAAT CACACAGACC
GGCAGAGCGA TTGAAGGATT CTTACTGTTG TTGATCAGTT TTTTGCTGCT TAACCTTCTG
ATCACTGGAG GGATGGAAGT TCTCAATCGA GTTGTGATCA GATCCCAGCA ATAG
 
Protein sequence
MKRSQHFCLQ VGVALALLTI LGVLINNLAV NLIRTDMGLS FLWLGRPAGF ALAEHPLSYR 
PSDSYAWALC MGWLNSLKVI LCGLVLATVI GVLAGAARSS SNLLLRALSS GYVALIRQIP
LLLQLLFWYF VAFLSLSGTP LAPLGALIRV SNQGIELLGL NLSVEFSALL VGLSIFTAAS
IAEIVRGGLN SVPSGQWEAF RSLGLPEGFG LRRVVLPQAL PAILPGLTSQ YLNLAKNSTL
AIAVGYADVY AVSDTTITQT GRAIEGFLLL LISFLLLNLL ITGGMEVLNR VVIRSQQ