Gene P9303_12111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_12111 
Symbol 
ID4776774 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand- 
Start bp1054785 
End bp1055813 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content54% 
IMG OID640086720 
ProductABC transporter for amino acids, membrane component 
Protein accessionYP_001017225 
Protein GI124022918 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0765] ABC-type amino acid transport system, permease component 
TIGRFAM ID[TIGR01726] amine acid ABC transporter, permease protein, 3-TM region, His/Glu/Gln/Arg/opine family 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGTCTG GGCCAAGCCC TTTTAAACGT CTGAAACGGC ACCTATTGGC CACCCCTCTG 
GATGGCTTGA TGACTGTTTT GCTGCTTGCC CTGCTTGGTT GGGTTGCGAC CACAACCCTG 
CATTGGCTTT TTGTTGATGC GGATTGGCAA GTCGTTAGTC AAAACCTTCC GCTGTATGCC 
TTTGGCAGCT ATCCACCTCA TCAACGTTGG CGCCCATTTC TTTGGATTGC GCTGCTGATA 
GGGCTCACCT TATTAACTCT GTTAGGGCCA CGTCGGGGTT GGATTCGTAA GGCCTTGCCA 
TTGGTATGGA TTGCAATGGT GCCCTGTGGT GTGGTTCTTC TTGCCGGTGG CCTCGGTTTA 
CTGCCGATCC CTTCTCACGC CTGGGGTGGC CTAACCCTCA CCCTGCTGCT AACCGCCTGC 
AGTGGTGCTC TTGCCCTGCC GCTGGGCATC CTTTTGGCAC TCGGACGTCA AACCAGGCTG 
GCCGTGATCC AACGAAGTTG CAGTATCTAT ATCGACGTGA TGCGGGCTGT TCCTCTAATC 
GCAGTGTTGT TTTTTGGTCA GCTGTTGATT CCCCTTTTCC TTCCCATGCA TCTAGAGGTG 
AATCGAGTCT TGCGTGCTGT ATTGGCCTTC GCATTATTTG CTGCCGCATA CATCGCTGAA 
GACGTGCGAG GTGGATTGCA AGCGATCCCA CGAACCCAGC GTGAAGCTGC TGCTGTGCTG 
GGCCTGAGTC CTAAGCAAAT GATTCAACTT GTGGTGTTGC CGCAGGCACT TCGTACAGCT 
CTACCGGCCC TGACCAACCA AGCAGTTGGA TTACTTCAGA ACACCAGCCT GATGGCCATC 
TTGGGTTTGG TGGAACTGCT GGGGATCAGC CGCAGCCTGT TGGCCAACCC TGATTTCATT 
GGTCGGTATC TGGAGGTTTA TGTGTGGCTA GCTGGGGTTT ACTGGTTGGT TTGCACTGCT 
ATGGCCTTAC TTGCCCGTCA TCTTGAACAT CAACTGAGCC CCACAAGGTC TGCTACTTCA 
AAGCAATGA
 
Protein sequence
MQSGPSPFKR LKRHLLATPL DGLMTVLLLA LLGWVATTTL HWLFVDADWQ VVSQNLPLYA 
FGSYPPHQRW RPFLWIALLI GLTLLTLLGP RRGWIRKALP LVWIAMVPCG VVLLAGGLGL 
LPIPSHAWGG LTLTLLLTAC SGALALPLGI LLALGRQTRL AVIQRSCSIY IDVMRAVPLI 
AVLFFGQLLI PLFLPMHLEV NRVLRAVLAF ALFAAAYIAE DVRGGLQAIP RTQREAAAVL 
GLSPKQMIQL VVLPQALRTA LPALTNQAVG LLQNTSLMAI LGLVELLGIS RSLLANPDFI 
GRYLEVYVWL AGVYWLVCTA MALLARHLEH QLSPTRSATS KQ