| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_11091 |
|---|
| Symbol | |
|---|
| ID | 4777431 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 991898 |
|---|
| End bp | 993565 |
|---|
| Gene Length | 1668 bp |
|---|
| Protein Length | 555 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640086618 |
|---|
| Product | porin |
|---|
| Protein accession | YP_001017123 |
|---|
| Protein GI | 124022816 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.559273 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAACTCT TCCAGCAATT GCTGGTGGCA CCTGCTGCCT TGGGCCTGAT GGCGCCAATG
GCTGCGAATG CCGCAGACCT AGACATCAAA GGTGTGTCCG ATTATTCGGC CTCCAGCGAG
CAGGTCACCA GCATCTCCCA ATTCCAAGAT GTTTACCCAA CCGATTGGGC TTATCAGGCG
CTGAGCAACC TGATTGAGCG CTACGGCTGT GTAGCTGGTT ATCCAAGTGG TAGCTACCTG
GGCAACAGAG CAATGACCCG CTTTGAAGCG GCTGCTCTGT TGAATGCCTG CCTCGATCGC
ATCACTGAAG TCACCGACGA ACTGCGTCGC TTGCTCAACG AATTCGAGCA GGAGCTTGCC
ATTCTCAAGG GCCGTGTTGA TGGGCTAGAA GCCCGCGTTG GTGAACTCGA AGCCACTCAG
TTCTCAACAA CAACCAAGCT TGTTGGTCAG ACATCCTTCG TTCTTGGAGC AGTCAATGCT
GGAGGTGATG AGTCCCTTTC AGATCCGTAC AACGAAGAAG TTGGAGCGTT TACATTCACA
TATGATCTGC GCCTTGGTCT TAATACAAGC TTTACGGGTA AAGATCTTCT TTATACCCGA
CTTCGTTCGG GAAATATGGA CTCAACTGCT TGGGAAGGTG AAGGTCTTAA GGGATCACTA
ACAGCTCTAG ATACTGCTTC TGCGACTGAT GATATCGTAA CGATCGATCG CCTCTATTAT
AGGTTCCCTG TTGGCGATGA ATTTACATTT ATCGCTGGAC CATTGGCACG AAATACTGAA
ATGCTCGGTA TTAAGCCCAC GGCCTATGGA AAGAGCAAAG TACTCGATTA CTTTGGTGGA
ACAATGGGCA CTCCTGGCGT CTATAACAAA GAAACAGGAG GTGCTTTTGG TGCAATATGG
AAGCAAAAAA CCAGCAAAGG TGATCCAGCA TTTAGTGCTT CTGTGAGCTA TGTTTCTGAC
GCAGGTGAGG CTAACGATGG CAACCCATCA ACAGGTGGGT TTATTACAGA CAATGCCGAA
GGAAATATTA CAGGGCAATT GGCATATAGC AGTAAAAGAT GGGGTGTTGC TTTGGGCTAT
CGTTACGGTC AATGCGGTGT TAAATTTCGT CGCGGCACCG ACTTTGTTGC AGACAACAAA
TGGCATCAAA ATTGCCAACA GGTCGTTGGC TTTGATGCTG ATGGAGACGA GGTCTTTGAT
CAACGCTCCG GTGCATATTC CAACAACTTT GCTGTTAATG CATTCTGGAA ACCTGAGGAT
TCAGGTTGGA TCCCGTCCGT CAGCGCAGGT TGGGGTCTTT CTGGTCTGAG TGGTGATTTC
TACGATCTTG CCGACAACGA CCTAGAGGAT GATCTTGAGG ACCAGGTAGC AGATCAATTC
CAAAGCTGGA TGGTTGGATT GCAATGGAGC GATGTCTTTA TTGAAGGTAA TTACCTAGGA
CTTGCAGGAG GTCAACCGCA GTTTGTTACC AGTCTTAAGG GTGATGAAAC CACTTATGAT
GGTAATTATG CCTTTGAACT TTGGTATAAG TTCCAAGTTA CTGACAACAT CTCAATCACA
CCAGCTGTGT TTTATCTGAG TCGTCCAATG GGGCAAAATA CCGGAGATCA GTACGATAAC
CAGTTCAATG TTTTTGGAGG AGTTGTTCAA ACTACGTTTA AGTTCTAA
|
|---|
| Protein sequence | MKLFQQLLVA PAALGLMAPM AANAADLDIK GVSDYSASSE QVTSISQFQD VYPTDWAYQA
LSNLIERYGC VAGYPSGSYL GNRAMTRFEA AALLNACLDR ITEVTDELRR LLNEFEQELA
ILKGRVDGLE ARVGELEATQ FSTTTKLVGQ TSFVLGAVNA GGDESLSDPY NEEVGAFTFT
YDLRLGLNTS FTGKDLLYTR LRSGNMDSTA WEGEGLKGSL TALDTASATD DIVTIDRLYY
RFPVGDEFTF IAGPLARNTE MLGIKPTAYG KSKVLDYFGG TMGTPGVYNK ETGGAFGAIW
KQKTSKGDPA FSASVSYVSD AGEANDGNPS TGGFITDNAE GNITGQLAYS SKRWGVALGY
RYGQCGVKFR RGTDFVADNK WHQNCQQVVG FDADGDEVFD QRSGAYSNNF AVNAFWKPED
SGWIPSVSAG WGLSGLSGDF YDLADNDLED DLEDQVADQF QSWMVGLQWS DVFIEGNYLG
LAGGQPQFVT SLKGDETTYD GNYAFELWYK FQVTDNISIT PAVFYLSRPM GQNTGDQYDN
QFNVFGGVVQ TTFKF
|
|---|
| |