| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_10011 |
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| Symbol | crtH |
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| ID | 4778823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 915200 |
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| End bp | 916762 |
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| Gene Length | 1563 bp |
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| Protein Length | 520 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640086509 |
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| Product | putative carotenoid isomerase |
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| Protein accession | YP_001017015 |
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| Protein GI | 124022708 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG1233] Phytoene dehydrogenase and related proteins |
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| TIGRFAM ID | [TIGR02730] carotene isomerase |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.243247 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACCTA TCCGCATCGA AAAAGACGCA ACGCAGCCTT GGGATGCTGT GGTTATCGGT
TCGGGCATCG GCGGCCTGGT CACCGCCAGT CAGCTAGCTG TCAAAGGTGC CAAGGTTCTT
GTTCTGGAGA GCTACACAAT CCCAGGTGGT AGTAGCGGCT CATTCCAGCG AGAGGGCTAC
ACCTTTGATG TAGGTGCATC AATGATCTTC GGGTTCGGAG AAAAGGGATA CACCAACCTG
CTCACCCGAG CCTTGGCCGA TGTGGGTGAG CACTGTGACA CCCTGCCTGA CCCCGCCCAA
CTCGCCTACC ACCTTCCTGG AGGATTAGAG CTCGCAGTTG ATCGGAAATA CGAGCAGTTC
ATTGCTGATC TCACCGCACG CTTCCCCCAC GAAGCGAAGG GGATCCGTCA CTTTTACGAC
ATCTGTTGGC AAGTGTTCAA CTGCCTGGAT GCAATGCCAC TGCTATCGAT CGAGGATCCC
ACTTATCTGG CCAAAGTTTT TTTCAAGTCC CCCCTGGCCT GTCTCGGTCT TGCGCGCTGG
TTGCCCGTCA ACGTGGGTGA TGTAGCCAGG CGTCACATCA AAGACCCAGA ACTGTTGCGG
TTCATCGACA TTGAATGCTT CTGCTGGTCA GTGATGCCTG CCGACCTCAC ACCGATGATC
AATGCTGGCA TGGTGTTTTC AGATCGCCAT GCCGGTGGCA TCAACTACCC CAAAGGAGGC
GTTGGTGTGA TAGCCCAAAA GCTCGTCAAA GGCATGCAAC GTCATGGTGG TGAGATCCGC
TACAAGGCAC GTGTCACACG AGTGGTGCTA AAAGATAACC GTGCTGTTGG TGTACAGCTA
GCAAATGGAG AAATCATCCA CGCCCGCAGG GTGATATCCA ACGCCACTCG CTGGGACACA
TTCAGCGGTG AGGGGTCCAA ACAGGCCCTG GTGGATGCAG AACACACACC CGCAGCGGAG
CAGACCTGGC GACGCCGCTA TGTGCCCTCG CCATCCTTCC TCTCTCTTCA CCTTGGGGTC
CGTAACGAGG CCATTCCAGC CAACAGCCAC TGCCACCATC TGCTCCTAGA AAGCTGGGAT
GAAATGGAGA GTGAACAGGG TGTCGCATTC GTCTCGATGC CGACTCTCCT GGATCCATCC
CTGTCGCCAG AGGGGCATCA CATCGTCCAC GCCTTCACAC CATCCTCAAT GCAGGCATGG
CAAGACCTAA GCCCTGCGAC CTACAACAGC AAAAAGCAAG CTGATGCTGA TCGTCTAATC
AGGAAACTCG AAAAAATCCT GCCTGGCTTA AGTCAAGCCA TCGTTCACCG AGAGGTGGGC
ACTCCTCGTA GCCATCGACG TTTCCTAGGA CGATTTCAGG GTAGCTATGG GCCAATCCCC
TCAAGTCGTT TACCAGGCCT TCTCACCATG CCCTTTAACC GCACTGGACT CAAAGGGCTT
TATTGCGTCG GCGACTCTTG TTTCCCTGGC CAAGGCCTAA ATGCAGTTGC TTTTAGTGGC
TTTGCCTGCT CCCATCTCAT CGGTGCCGAT TTAGGGATCA ACCCCTGGGC CCTACCTAAT
TGA
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| Protein sequence | MEPIRIEKDA TQPWDAVVIG SGIGGLVTAS QLAVKGAKVL VLESYTIPGG SSGSFQREGY
TFDVGASMIF GFGEKGYTNL LTRALADVGE HCDTLPDPAQ LAYHLPGGLE LAVDRKYEQF
IADLTARFPH EAKGIRHFYD ICWQVFNCLD AMPLLSIEDP TYLAKVFFKS PLACLGLARW
LPVNVGDVAR RHIKDPELLR FIDIECFCWS VMPADLTPMI NAGMVFSDRH AGGINYPKGG
VGVIAQKLVK GMQRHGGEIR YKARVTRVVL KDNRAVGVQL ANGEIIHARR VISNATRWDT
FSGEGSKQAL VDAEHTPAAE QTWRRRYVPS PSFLSLHLGV RNEAIPANSH CHHLLLESWD
EMESEQGVAF VSMPTLLDPS LSPEGHHIVH AFTPSSMQAW QDLSPATYNS KKQADADRLI
RKLEKILPGL SQAIVHREVG TPRSHRRFLG RFQGSYGPIP SSRLPGLLTM PFNRTGLKGL
YCVGDSCFPG QGLNAVAFSG FACSHLIGAD LGINPWALPN
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