Gene P9303_09621 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_09621 
SymbolrecB 
ID4777315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp871054 
End bp874878 
Gene Length3825 bp 
Protein Length1274 aa 
Translation table11 
GC content52% 
IMG OID640086472 
ProductUvrD/REP helicase subunit B 
Protein accessionYP_001016978 
Protein GI124022671 
COG category[L] Replication, recombination and repair 
COG ID[COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) 
TIGRFAM ID[TIGR00609] exodeoxyribonuclease V, beta subunit 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.484397 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTAATG TCAGCCGTGA ACCTGAATAT TGTTTCCAGT CCAATGATTA CCCCCTCGGA 
CCTGGCCTGC GCTTACTAGA AGCCAGTGCA GGAACAGGCA AGACTTTTGC TCTTGCTCAT
CTGGCTTTAC GCCTGCTGAC TGAAGGCGGC CACCAAATTA GTGAACTGTT GGTGGTCACC
TTCACTGAAG CTGCAGCAGC TGAGCTGCGC TCTCGCATTG GCCAACGCCT TGAGCATGCT
CTTGAAGGCC TTGAAGCCCT CGATCATGGC GCCACTGATA AGCCGCCTGA TCTTGTTCTC
GAGCAATGGC TTCAGTGCAA CGGCCACGAT GTTTCTCAAC GGCATCAATG GATCTCCTCC
CTCTTGGTAG CACTTGAGAG CCTTGATCTG GCTGATATCA CCACCATCCA TGGGTTCTGC
AGGCGTACCT TGCGGCGTCA GGCTCTTGAG AGTGGTGCTG TCATGGACCC ACGCCTGGAT
GACTCAGGAC AACAACTTGT TCAAGAAGTT GTTCATGATT ATTGGCAGCA ACAGGTCTTA
GCTCTCGATG CCCAGCATGT ACGCGGACTT CTGCATGCTG GCTTGAGCGT TGAGAACTTG
GCAAAGGGTT TGCTCAAACT CGATAGCGAT CCCAGCTTGG CTCTCGAAAC TCACACCAGC
AATCTGCAGT CTTCACAACC GCTATCAAGC CAGTTTGATG CCTACCTTCA GCAGTGCTGG
CAACAGTTTG TTGATCACTG GCAACGACAC GGCTCTGAAT TGGATATCGC CTTATCGAGC
CGCGCTGCTG ATTGGCGATC TCTGGGCTCT AAAGATACAA AACCCTTTAG CCCCAAACCC
AAAAAAGATC GTTTCGCCAT CCTCAATCAC TGGCTTGAAG CTTTCTCCCA ATCACCACAA
CATTCTGATC AGCCTTTTAC TCCTGGCTAC GCAGCGATCC GTGATCAATC CTTGCTCACG
GATTACTTTC ATCCAGCTGT TGTTTGCACT GTTGCTCGGC GTTGCGGCGA AGAAAACCCC
AATCCTCTGA TGCCTGCACT GCAGAGATCA ATTGCTGATC TTTGTGATGG CCCTGCTGAA
CAGGTGTGGA ATCATGCCTT GCATTGGGGG CTCTCTGCGT TAGCTGAGCG CCGCAGGCAG
CGTGGTGTGA TGAGCTACGC AGAGCTTCTC TCTGCACTTG ATCCCAAACC TCAATCCGAG
ACCATCGCTC AACCCCATCC TGATCAACAA GCACCATGGC TTGAGGCGTT AAGACAGCGT
TATCGCGTCG CGCTGATTGA TGAGTTTCAA GACACGGATC CTGTGCAATG GCGTCTGCTT
GAAGGGGCCT TTGCACATAG CCCTGACCAT CTTCTGTTGA TGGTGGGTGA CCCTAAGCAG
GCGATTTATC GATTTCGTGG CGGTGATCTC AACACCTACA TGCATGCACG CTCAAAGGTT
GATCGCATCG ACGCCTTGCT TGATAACTTC CGTACAACGA CTCCATTGCT TGATGGCTTG
AACGACTTGA TGGCTCCAGG TTTGAGGCGT TCAAAACTAG ATGTTCCATC TTTGACTGCT
TGTAGTCAAG CAACACCAAG GTCTTTGCCC CTTGGTGTTA ACCCACTTCA ACTGCTCAAT
CTTGATGAAG CTACTCATCC AACAGGCTCA ATACCTTCTC CACTGACCTC TAAAACCAAC
CTGGAAGAAC AGATCCCAAC GGCTGTTGCC CATGCTGTTT TGGATTTGCT TCAGAGTGAT
TCATACAACT TCAGCCCTTC TGATATCTGC ATACTTGTTG GTCGTCATCG ACAGGCAGCC
AGCATTCGCC AGGGCCTTGC TGTCGCTGGA GTGCCCACTC GGCTTGTTAG CCAGGGGGAT
GTTCTCACCA GTGAAGCGGC CCAGGTCTTA CAACGTTTTC TGGATTGTTT GGCCAGACCC
TCCCATAGCA GCAGTTTGAA GCTTGTGGCC TGTTCAGCTC TGATGCAATG GAACACAGAG
CAGCTCGCTC ATGCTGAATG CAATGGTGAG CTCGATCAAT TAGCCCTTCG CTTCAGGAAT
TGGGCTATTA ATCTTCCCCG CCTTGGTCTT ATGGGCTGCC TAGCGGAGTT ACTTGAAGGC
CGCACAATTG CTGATCTCTC AGAACGCGGA CGCCTTTTAG GCGACTTATA TCAATGTGCG
CAGCTTGTCC AGGAGGTGAT TCATCGCCAA GGCTTGGATG CGTCTACTGC AGCCGATTGG
TTGCGTCGCC AACGACTACA ACCTGTTGAT CCGGTTCCAG AGGTTCGACA ACCTCATAGT
GATGTAGCCG AGAGTGCGGT TGCTGTGGTC ACAGTGCATC GCAGCAAGGG GATGGAATAT
CCCGTTGTGA TTTGTCCCTA CCTCTGGCAA GCCCCCTCCC TCCCCCACGG CCCCCTGTGG
AGATCTGGCT CGGAGTCGCA TTGGTGTGTA GCACTCAGCA CAGGCTGGGG GAAAGGATGG
CAGCTTTCAC AGCAGTCTCA TCAAGCATCC CTGCAGGAAG CCGAACGTCT TGCCTATGTG
GCGATCACAA GAGCCTGCTC TCTGTTGATG TTGATTTGGG CTCGGGGCGC CAAACAGGAA
GGCAATCCCC TCAGCGCTTG GCTGTTTGGT GTGGATGCCA TCGATGCAGC GATGCAGGAT
CTCACTCCGG AACGAATGAG TGCTTGGCTT GATCGCCAGC AGTTGCCGAT CACTGTTGTT
CCGGCTCAGC TGAAGTCGAT GCAGCAGCGC TGGCAACCGC CGCCGCTTCA AGGCGAGTTA
GCTCTTGGCC AAACACCGCA ACGGCGCCTT GATCTGTCTT GGGGTCGCAG TAGTTATTCC
GCTTGGGTGT CTGCTGCACA CACTTATGAC GGCAGTGCTC CTGCTGATCC TTTGGAGTTG
GAAGAAGGTC GAGATAGCGA TCAGCAGAAG CTTGAACCCA TGCTCAAACT TCAAGATCAG
AGTGCGATTG CTGATGCCTC TCGCTCAACT CCAACGTTGA ACTGGTCTGA CCAGAGCCCT
CTGGGGCAAT TCCCTCGTGG TGCTGTAGCA GGGGATTGCT TACACCGGAT TCTTGAACGA
CTGGATTTTT GCAAGCCATT GCAAGATCCC AATGCCGTCA TCGTGATTGA AGAAGAGCTA
CGACGCGCAG GCCTTGACAT CACTCTGCTC GCCTCAGTTC AGGATGGTCT TGACAGGGTG
TTGAGTACTC CAATTGGTGG TTCTCTTGGA GGCTTGCGAC TGAATCAACT GCATGGTCAA
CGTCGCATTC ATGAACTCAG CTTCGATTTG CCAATTGCTC ATCAAGGCAA GGTGTTGCGT
TCGTTTGATC TAGCCAGTGT TTTTCATCTG AATCCATTGG CTCGCTTTGG CTTGCCCTAT
GCCGAAATGA TTAAAGGTCT CAATGTTTGC AGTCGTGGTT TTCTTACCGG TTCGATTGAT
CTTGTGTTCA CCGATGCAGA AGATTCTTTA GAAGCTCGTT GGTGGGTTGC TGATTGGAAA
AGCAACTGGA TCGGTCGGCG TGATTCAGAG GGGCAGGCTG TCGCTTGTGG TCCGCTCCAT
TACGACGACT CCGCAATGGA GCAGCAGATG CTCCTTCATC ATTACCCTCT TCAAGCCCAT
CTTTATTTGG TCGCACTCCA TCGTTTTCTG CGTTGGAGGT TGCCAAGTTA CGAACCAAAG
CTCCATCTAG GTGGATACGT CTACGTTTTT CTTAGAGGTC TCCCAGGCGC TAAGGCCATG
AACGGTCGCT CTCTTACTAA ACCAGTGCCT GGCTTGATTG TTGAGCCCGC ACCATTGGAG
CGGGTTTTGC TTTTGGATCG CTTGCTCAAG AACGGAGGAC AATGA
 
Protein sequence
MANVSREPEY CFQSNDYPLG PGLRLLEASA GTGKTFALAH LALRLLTEGG HQISELLVVT 
FTEAAAAELR SRIGQRLEHA LEGLEALDHG ATDKPPDLVL EQWLQCNGHD VSQRHQWISS
LLVALESLDL ADITTIHGFC RRTLRRQALE SGAVMDPRLD DSGQQLVQEV VHDYWQQQVL
ALDAQHVRGL LHAGLSVENL AKGLLKLDSD PSLALETHTS NLQSSQPLSS QFDAYLQQCW
QQFVDHWQRH GSELDIALSS RAADWRSLGS KDTKPFSPKP KKDRFAILNH WLEAFSQSPQ
HSDQPFTPGY AAIRDQSLLT DYFHPAVVCT VARRCGEENP NPLMPALQRS IADLCDGPAE
QVWNHALHWG LSALAERRRQ RGVMSYAELL SALDPKPQSE TIAQPHPDQQ APWLEALRQR
YRVALIDEFQ DTDPVQWRLL EGAFAHSPDH LLLMVGDPKQ AIYRFRGGDL NTYMHARSKV
DRIDALLDNF RTTTPLLDGL NDLMAPGLRR SKLDVPSLTA CSQATPRSLP LGVNPLQLLN
LDEATHPTGS IPSPLTSKTN LEEQIPTAVA HAVLDLLQSD SYNFSPSDIC ILVGRHRQAA
SIRQGLAVAG VPTRLVSQGD VLTSEAAQVL QRFLDCLARP SHSSSLKLVA CSALMQWNTE
QLAHAECNGE LDQLALRFRN WAINLPRLGL MGCLAELLEG RTIADLSERG RLLGDLYQCA
QLVQEVIHRQ GLDASTAADW LRRQRLQPVD PVPEVRQPHS DVAESAVAVV TVHRSKGMEY
PVVICPYLWQ APSLPHGPLW RSGSESHWCV ALSTGWGKGW QLSQQSHQAS LQEAERLAYV
AITRACSLLM LIWARGAKQE GNPLSAWLFG VDAIDAAMQD LTPERMSAWL DRQQLPITVV
PAQLKSMQQR WQPPPLQGEL ALGQTPQRRL DLSWGRSSYS AWVSAAHTYD GSAPADPLEL
EEGRDSDQQK LEPMLKLQDQ SAIADASRST PTLNWSDQSP LGQFPRGAVA GDCLHRILER
LDFCKPLQDP NAVIVIEEEL RRAGLDITLL ASVQDGLDRV LSTPIGGSLG GLRLNQLHGQ
RRIHELSFDL PIAHQGKVLR SFDLASVFHL NPLARFGLPY AEMIKGLNVC SRGFLTGSID
LVFTDAEDSL EARWWVADWK SNWIGRRDSE GQAVACGPLH YDDSAMEQQM LLHHYPLQAH
LYLVALHRFL RWRLPSYEPK LHLGGYVYVF LRGLPGAKAM NGRSLTKPVP GLIVEPAPLE
RVLLLDRLLK NGGQ