Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_09621 |
Symbol | recB |
ID | 4777315 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 871054 |
End bp | 874878 |
Gene Length | 3825 bp |
Protein Length | 1274 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640086472 |
Product | UvrD/REP helicase subunit B |
Protein accession | YP_001016978 |
Protein GI | 124022671 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
TIGRFAM ID | [TIGR00609] exodeoxyribonuclease V, beta subunit |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.484397 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTAATG TCAGCCGTGA ACCTGAATAT TGTTTCCAGT CCAATGATTA CCCCCTCGGA CCTGGCCTGC GCTTACTAGA AGCCAGTGCA GGAACAGGCA AGACTTTTGC TCTTGCTCAT CTGGCTTTAC GCCTGCTGAC TGAAGGCGGC CACCAAATTA GTGAACTGTT GGTGGTCACC TTCACTGAAG CTGCAGCAGC TGAGCTGCGC TCTCGCATTG GCCAACGCCT TGAGCATGCT CTTGAAGGCC TTGAAGCCCT CGATCATGGC GCCACTGATA AGCCGCCTGA TCTTGTTCTC GAGCAATGGC TTCAGTGCAA CGGCCACGAT GTTTCTCAAC GGCATCAATG GATCTCCTCC CTCTTGGTAG CACTTGAGAG CCTTGATCTG GCTGATATCA CCACCATCCA TGGGTTCTGC AGGCGTACCT TGCGGCGTCA GGCTCTTGAG AGTGGTGCTG TCATGGACCC ACGCCTGGAT GACTCAGGAC AACAACTTGT TCAAGAAGTT GTTCATGATT ATTGGCAGCA ACAGGTCTTA GCTCTCGATG CCCAGCATGT ACGCGGACTT CTGCATGCTG GCTTGAGCGT TGAGAACTTG GCAAAGGGTT TGCTCAAACT CGATAGCGAT CCCAGCTTGG CTCTCGAAAC TCACACCAGC AATCTGCAGT CTTCACAACC GCTATCAAGC CAGTTTGATG CCTACCTTCA GCAGTGCTGG CAACAGTTTG TTGATCACTG GCAACGACAC GGCTCTGAAT TGGATATCGC CTTATCGAGC CGCGCTGCTG ATTGGCGATC TCTGGGCTCT AAAGATACAA AACCCTTTAG CCCCAAACCC AAAAAAGATC GTTTCGCCAT CCTCAATCAC TGGCTTGAAG CTTTCTCCCA ATCACCACAA CATTCTGATC AGCCTTTTAC TCCTGGCTAC GCAGCGATCC GTGATCAATC CTTGCTCACG GATTACTTTC ATCCAGCTGT TGTTTGCACT GTTGCTCGGC GTTGCGGCGA AGAAAACCCC AATCCTCTGA TGCCTGCACT GCAGAGATCA ATTGCTGATC TTTGTGATGG CCCTGCTGAA CAGGTGTGGA ATCATGCCTT GCATTGGGGG CTCTCTGCGT TAGCTGAGCG CCGCAGGCAG CGTGGTGTGA TGAGCTACGC AGAGCTTCTC TCTGCACTTG ATCCCAAACC TCAATCCGAG ACCATCGCTC AACCCCATCC TGATCAACAA GCACCATGGC TTGAGGCGTT AAGACAGCGT TATCGCGTCG CGCTGATTGA TGAGTTTCAA GACACGGATC CTGTGCAATG GCGTCTGCTT GAAGGGGCCT TTGCACATAG CCCTGACCAT CTTCTGTTGA TGGTGGGTGA CCCTAAGCAG GCGATTTATC GATTTCGTGG CGGTGATCTC AACACCTACA TGCATGCACG CTCAAAGGTT GATCGCATCG ACGCCTTGCT TGATAACTTC CGTACAACGA CTCCATTGCT TGATGGCTTG AACGACTTGA TGGCTCCAGG TTTGAGGCGT TCAAAACTAG ATGTTCCATC TTTGACTGCT TGTAGTCAAG CAACACCAAG GTCTTTGCCC CTTGGTGTTA ACCCACTTCA ACTGCTCAAT CTTGATGAAG CTACTCATCC AACAGGCTCA ATACCTTCTC CACTGACCTC TAAAACCAAC CTGGAAGAAC AGATCCCAAC GGCTGTTGCC CATGCTGTTT TGGATTTGCT TCAGAGTGAT TCATACAACT TCAGCCCTTC TGATATCTGC ATACTTGTTG GTCGTCATCG ACAGGCAGCC AGCATTCGCC AGGGCCTTGC TGTCGCTGGA GTGCCCACTC GGCTTGTTAG CCAGGGGGAT GTTCTCACCA GTGAAGCGGC CCAGGTCTTA CAACGTTTTC TGGATTGTTT GGCCAGACCC TCCCATAGCA GCAGTTTGAA GCTTGTGGCC TGTTCAGCTC TGATGCAATG GAACACAGAG CAGCTCGCTC ATGCTGAATG CAATGGTGAG CTCGATCAAT TAGCCCTTCG CTTCAGGAAT TGGGCTATTA ATCTTCCCCG CCTTGGTCTT ATGGGCTGCC TAGCGGAGTT ACTTGAAGGC CGCACAATTG CTGATCTCTC AGAACGCGGA CGCCTTTTAG GCGACTTATA TCAATGTGCG CAGCTTGTCC AGGAGGTGAT TCATCGCCAA GGCTTGGATG CGTCTACTGC AGCCGATTGG TTGCGTCGCC AACGACTACA ACCTGTTGAT CCGGTTCCAG AGGTTCGACA ACCTCATAGT GATGTAGCCG AGAGTGCGGT TGCTGTGGTC ACAGTGCATC GCAGCAAGGG GATGGAATAT CCCGTTGTGA TTTGTCCCTA CCTCTGGCAA GCCCCCTCCC TCCCCCACGG CCCCCTGTGG AGATCTGGCT CGGAGTCGCA TTGGTGTGTA GCACTCAGCA CAGGCTGGGG GAAAGGATGG CAGCTTTCAC AGCAGTCTCA TCAAGCATCC CTGCAGGAAG CCGAACGTCT TGCCTATGTG GCGATCACAA GAGCCTGCTC TCTGTTGATG TTGATTTGGG CTCGGGGCGC CAAACAGGAA GGCAATCCCC TCAGCGCTTG GCTGTTTGGT GTGGATGCCA TCGATGCAGC GATGCAGGAT CTCACTCCGG AACGAATGAG TGCTTGGCTT GATCGCCAGC AGTTGCCGAT CACTGTTGTT CCGGCTCAGC TGAAGTCGAT GCAGCAGCGC TGGCAACCGC CGCCGCTTCA AGGCGAGTTA GCTCTTGGCC AAACACCGCA ACGGCGCCTT GATCTGTCTT GGGGTCGCAG TAGTTATTCC GCTTGGGTGT CTGCTGCACA CACTTATGAC GGCAGTGCTC CTGCTGATCC TTTGGAGTTG GAAGAAGGTC GAGATAGCGA TCAGCAGAAG CTTGAACCCA TGCTCAAACT TCAAGATCAG AGTGCGATTG CTGATGCCTC TCGCTCAACT CCAACGTTGA ACTGGTCTGA CCAGAGCCCT CTGGGGCAAT TCCCTCGTGG TGCTGTAGCA GGGGATTGCT TACACCGGAT TCTTGAACGA CTGGATTTTT GCAAGCCATT GCAAGATCCC AATGCCGTCA TCGTGATTGA AGAAGAGCTA CGACGCGCAG GCCTTGACAT CACTCTGCTC GCCTCAGTTC AGGATGGTCT TGACAGGGTG TTGAGTACTC CAATTGGTGG TTCTCTTGGA GGCTTGCGAC TGAATCAACT GCATGGTCAA CGTCGCATTC ATGAACTCAG CTTCGATTTG CCAATTGCTC ATCAAGGCAA GGTGTTGCGT TCGTTTGATC TAGCCAGTGT TTTTCATCTG AATCCATTGG CTCGCTTTGG CTTGCCCTAT GCCGAAATGA TTAAAGGTCT CAATGTTTGC AGTCGTGGTT TTCTTACCGG TTCGATTGAT CTTGTGTTCA CCGATGCAGA AGATTCTTTA GAAGCTCGTT GGTGGGTTGC TGATTGGAAA AGCAACTGGA TCGGTCGGCG TGATTCAGAG GGGCAGGCTG TCGCTTGTGG TCCGCTCCAT TACGACGACT CCGCAATGGA GCAGCAGATG CTCCTTCATC ATTACCCTCT TCAAGCCCAT CTTTATTTGG TCGCACTCCA TCGTTTTCTG CGTTGGAGGT TGCCAAGTTA CGAACCAAAG CTCCATCTAG GTGGATACGT CTACGTTTTT CTTAGAGGTC TCCCAGGCGC TAAGGCCATG AACGGTCGCT CTCTTACTAA ACCAGTGCCT GGCTTGATTG TTGAGCCCGC ACCATTGGAG CGGGTTTTGC TTTTGGATCG CTTGCTCAAG AACGGAGGAC AATGA
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Protein sequence | MANVSREPEY CFQSNDYPLG PGLRLLEASA GTGKTFALAH LALRLLTEGG HQISELLVVT FTEAAAAELR SRIGQRLEHA LEGLEALDHG ATDKPPDLVL EQWLQCNGHD VSQRHQWISS LLVALESLDL ADITTIHGFC RRTLRRQALE SGAVMDPRLD DSGQQLVQEV VHDYWQQQVL ALDAQHVRGL LHAGLSVENL AKGLLKLDSD PSLALETHTS NLQSSQPLSS QFDAYLQQCW QQFVDHWQRH GSELDIALSS RAADWRSLGS KDTKPFSPKP KKDRFAILNH WLEAFSQSPQ HSDQPFTPGY AAIRDQSLLT DYFHPAVVCT VARRCGEENP NPLMPALQRS IADLCDGPAE QVWNHALHWG LSALAERRRQ RGVMSYAELL SALDPKPQSE TIAQPHPDQQ APWLEALRQR YRVALIDEFQ DTDPVQWRLL EGAFAHSPDH LLLMVGDPKQ AIYRFRGGDL NTYMHARSKV DRIDALLDNF RTTTPLLDGL NDLMAPGLRR SKLDVPSLTA CSQATPRSLP LGVNPLQLLN LDEATHPTGS IPSPLTSKTN LEEQIPTAVA HAVLDLLQSD SYNFSPSDIC ILVGRHRQAA SIRQGLAVAG VPTRLVSQGD VLTSEAAQVL QRFLDCLARP SHSSSLKLVA CSALMQWNTE QLAHAECNGE LDQLALRFRN WAINLPRLGL MGCLAELLEG RTIADLSERG RLLGDLYQCA QLVQEVIHRQ GLDASTAADW LRRQRLQPVD PVPEVRQPHS DVAESAVAVV TVHRSKGMEY PVVICPYLWQ APSLPHGPLW RSGSESHWCV ALSTGWGKGW QLSQQSHQAS LQEAERLAYV AITRACSLLM LIWARGAKQE GNPLSAWLFG VDAIDAAMQD LTPERMSAWL DRQQLPITVV PAQLKSMQQR WQPPPLQGEL ALGQTPQRRL DLSWGRSSYS AWVSAAHTYD GSAPADPLEL EEGRDSDQQK LEPMLKLQDQ SAIADASRST PTLNWSDQSP LGQFPRGAVA GDCLHRILER LDFCKPLQDP NAVIVIEEEL RRAGLDITLL ASVQDGLDRV LSTPIGGSLG GLRLNQLHGQ RRIHELSFDL PIAHQGKVLR SFDLASVFHL NPLARFGLPY AEMIKGLNVC SRGFLTGSID LVFTDAEDSL EARWWVADWK SNWIGRRDSE GQAVACGPLH YDDSAMEQQM LLHHYPLQAH LYLVALHRFL RWRLPSYEPK LHLGGYVYVF LRGLPGAKAM NGRSLTKPVP GLIVEPAPLE RVLLLDRLLK NGGQ
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