Gene P9303_09591 details

Gene Information

• Locus tag: P9303_09591
• Symbol: recC
• ID: 4778853
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 865136
• End bp: 868447
• Gene Length: 3312 bp
• Protein Length: 1103 aa
• Translation table: 11
• GC content: 56%
• IMG OID: 640086469
• Product: exodeoxyribonuclease V gamma chain
• Protein accession: YP_001016975
• Protein GI: 124022668
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1330] Exonuclease V gamma subunit
• TIGRFAM ID: [TIGR01450] exodeoxyribonuclease V, gamma subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.507283
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGCTGACGA TCTACCGCAG CAACAGAGCG GAGTGGTTAG CTCGAGTGTT GGCGGAGCAG 
CTGCGTCTGG CACCACCAGG TCTATTTGAC TCAGTGGATG TCGTGGTGAA CACCTGGCCC 
ACAAGCCGCT GGCTGGGGGA ACAGTTGGCA AGCGTGAATG GCATCAGTGC TTTGGTGCGA 
TTCCCCTTTC CAGGATCACG CTTACGGCAG TTGGTTCGGA TGATCTTGGG GATCGATAGT 
GATGCTGAAG ATCCTTGGCG GGCCAGTCGA CTCGTTTGGC CTCTGCTTGA TTTGTTGCCA 
CAGCTTTTGG AGACTGAAGA AGCTGCGCCA TTGAGAGAAT GGGTCAATCG GCAGCCATCT 
CGGCCAGGCC ACCTCAACCG AGTGCAATGG CAGTTAGCGA GAAGCATTGC CGATGCCTTT 
GACGACTACG CGCTTTACCG CCCCAAGTTG ATCCATCAAT GGCTGGAGGG CAGTGATCGG 
CTTTTGAACT CATCGCAGGA GATGCCTTTA ACCCTGCGCT GGCAACCGCT GTTGTTGCGT 
TTATTAGCTG AACGTTTGAA CGTTGAACCG TTCGGGATTC AGGTGCATAG GGCTGTTTCA 
AAGCTGCGCA ACGGAGACCA CCCCGCCATG GCATTGCCAA GTCAACTGCG GCTTTTTGGC 
CTGAGCAGTC TTGCTCCGGT GCAAGTTGAG TTGATTCAGG CCCTCTCGGG TCTTGTGGAC 
GTACAGATGT TTCTGCTGAC CCCCTGTCCG GATCTTTGGC AACGATGTCG TAGCAGAAGG 
GAGACGTTGG GGAATGAGTG GACCGAGCCG GCTGATGGTT TTTGGTTGCT CGAAGCGCCG 
CGCTTAGAAG CCATCCTTGG ACGCATGGGC GCGGAATTTC AGCAGTTGCT GGAAGGGGGC 
GGTGAGAGTC AGCTCGGCCA GTGGCAGGAG GGTGATCTAT TCGCTGCGCC GGCCACCATG 
GCTTGTGAAT CCGGACAAGA ACCTACTTTG CTTGAGCAGC TTCAGCAGCA GCTTGTCTCG 
CCGGATGATC ATCAACCTCT AAGGCGCAGG CAAGAGGACA GTTCTTTGCA GTTTTTGGCT 
TGCCCTGGGC AATGGCGCCA GGTGCAGTTG GTCCGCGATC AGATCTTGCA ATGGTTTGCT 
GCCGATCCCA GCCTCGAACC CCGTGATGTG TTGGTGATGA CCCCACAGGT CAATCGTTTT 
GCTCCTCTGC TCGCCTCGGT GTTCAACGAT GCTGCAGCCA CTGGTGTGGA GCTTCCCTGG 
CGGCTCACAG ATCGCAGCCA GCAGGACAGC CCTGGGCTGA CGCAGGGGAT GTTGCAACTG 
CTTCAGATCG CAGGCGAGCG ATTGACTGCC ACCGCTCTTG AAGGCTTGCT CGCTAATCCG 
GCAATACAGC AGCAGCAAGG CTTCAGCCAG GACGATGCCA GTAGCCTCAG TCGCTGTTTG 
CAACGCACAG GATTTCGCTG GGGCCTTGAT GCCGAGGAGC GGGGTGGTGA TGAGACCCAT 
AGCCTCATCT GGTGCTTGGA TCGCTGGCTG CTTGGCTTGG TGTTGCCCAG CACACCAGGC 
CTGGCTCCTG GGGGAGCAGC ACCCTTTGCA GAGGGGCTGG AACCAGCCCA GCTTGCGAAG 
TGGTGGCAGC TTTTAGCTCA GTTCAGCCGG CAGCTGAAAG AGTTTCGTCG TGCTCGAACT 
TGTGGCGCTT GGGTAGAGCT TCTACAGGGT TTTGTCGAGG AGTTGTTTGG TGATGGTGGC 
TCTTGGGCCT GGGAGCGGCA GTGCCTGCTG ATCGCTTTGG AGGATTGGCG TCAGATTGGT 
GCTGACTGCA CGTTGTTGCT GGAAGCGGCT GTTGTAGCAG ATGTGTTGAA TGAAGCTCTC 
TCTGCAGATA GCGGTCGGTT TGGACATCGC ACTGGTGCCC TCACAGTGAG TGCTCTGGAG 
CCGATGCGTG CCATCCCTCA TCGTGTGATC GTGCTGATGG GATTGGACGC CGATGTTTTC 
CCTCGCCATC GCGAGCGAGC TGGCTTTCAT CTATTGGAGC AGCAGCGTCA GCTAGGTGAT 
CCACGCAGTA GTGATCAAGA TCGTTATGTG CTTTTGGAAG CATTGATGTC GACCCGACAG 
CATCTGCTGA TCACCTGGAA CAGCCGCGAT GAGCACACGG GCGAATGTCG CCCAGCTGCT 
AGCCCTGTGC AGCAATGGCT TGGACGGCTG CAGCATGAGC TCAGCGATGA GACGTTCCAG 
GGCCTATGTC GAGAACCAGC CGCCAATCCC CTTGAGCGCA GTAATTTTCT ATCTCAGGGG 
AGCCAACCGC CTCCTAGCTG TGACCGTCGC CATTTCGAGG CGCGCCGCTG GTTGGATAAA 
ACTCTGGCGC CACCACCCCT TGCCCTTGCG CTGCCTTTGC ATTGGAGTTC GGTGTCATTG 
GAGGCTTCTG CGGTTATCTC ATCTGAATTG TTGTTGCGCT GGTTAATCGC TCCCCAGCTG 
ATTTGGCTGG AGCAATTTCA GGTAACACCA CGTGAATGGT TTGATCCTGT TGAAGATCTT 
GAGGCCCTCG ATCTAGATGA ATGGCATCGA CATGGTCTGC TCAAGCAGCG CTTGTCAGAG 
CTGCTTGGCC ATCTCCCTAC GGATGAGAAT GCATTGTTGC AGGGATCAGA AGCAGGTGAT 
TGGAAGCATC GCTATGCCGG TCAAGGGACC CTTCCACCAG GAGCAGCTGC GACGTTGGAG 
TGCGAGCGTC TCGAACAACG TTGGCAGCAT TTACAGGCAA CGCTACTGAG CATGGGACCA 
TGCTCGACAC GACGTCTTGA ATTGGCGGAT GGCTCCAGGC AAATGCTCTG GGCTGGGGAC 
ACGGTTGTTG TGGTGCAACC AGGTCAGTTG AAGTCAAGGG GGGTGATGGA GGGATGGCTA 
AGCCATTTGC AGGTCTGCGC AAATCACACG CTTACGTCGG CAACTGTCGT CGTAGCCCGT 
TGTGGACCAG CAGCCAAGAA GGATCAATTT GAGATAGCTC TGCGTTGGCA GCCACTTCCA 
GCCGAGCAAG CAAGAGAACA ACTCATTGCT TTGCAGGCTT TGGCTTGTCA GGGCTTGAGT 
CAGTGTTGGC CGGTGCCACC GATGAGTGGT TGGGCCTACG CCAACGCCAA CAACAAATTG 
GCTGGTAGGG GAGAAGAAGC CTTCCGTCAG TCTTGGAGTG GCGGATTTAA TGTTCAGGGT 
GAGCGTGAAC GGGCTGAGAT GCAGCTCTGT TTTGGTCTGA ACTGCGAAGC TTCAGAGCTT 
CTCAACAGCG CTGGTTTTGA GCAGGCAAAC ACAAGCCTCT ATGGCCCTTT GGTTGAGGCA 
TTGGCGATCT AG 

 

Protein sequence

MLTIYRSNRA EWLARVLAEQ LRLAPPGLFD SVDVVVNTWP TSRWLGEQLA SVNGISALVR 
FPFPGSRLRQ LVRMILGIDS DAEDPWRASR LVWPLLDLLP QLLETEEAAP LREWVNRQPS 
RPGHLNRVQW QLARSIADAF DDYALYRPKL IHQWLEGSDR LLNSSQEMPL TLRWQPLLLR 
LLAERLNVEP FGIQVHRAVS KLRNGDHPAM ALPSQLRLFG LSSLAPVQVE LIQALSGLVD 
VQMFLLTPCP DLWQRCRSRR ETLGNEWTEP ADGFWLLEAP RLEAILGRMG AEFQQLLEGG 
GESQLGQWQE GDLFAAPATM ACESGQEPTL LEQLQQQLVS PDDHQPLRRR QEDSSLQFLA 
CPGQWRQVQL VRDQILQWFA ADPSLEPRDV LVMTPQVNRF APLLASVFND AAATGVELPW 
RLTDRSQQDS PGLTQGMLQL LQIAGERLTA TALEGLLANP AIQQQQGFSQ DDASSLSRCL 
QRTGFRWGLD AEERGGDETH SLIWCLDRWL LGLVLPSTPG LAPGGAAPFA EGLEPAQLAK 
WWQLLAQFSR QLKEFRRART CGAWVELLQG FVEELFGDGG SWAWERQCLL IALEDWRQIG 
ADCTLLLEAA VVADVLNEAL SADSGRFGHR TGALTVSALE PMRAIPHRVI VLMGLDADVF 
PRHRERAGFH LLEQQRQLGD PRSSDQDRYV LLEALMSTRQ HLLITWNSRD EHTGECRPAA 
SPVQQWLGRL QHELSDETFQ GLCREPAANP LERSNFLSQG SQPPPSCDRR HFEARRWLDK 
TLAPPPLALA LPLHWSSVSL EASAVISSEL LLRWLIAPQL IWLEQFQVTP REWFDPVEDL 
EALDLDEWHR HGLLKQRLSE LLGHLPTDEN ALLQGSEAGD WKHRYAGQGT LPPGAAATLE 
CERLEQRWQH LQATLLSMGP CSTRRLELAD GSRQMLWAGD TVVVVQPGQL KSRGVMEGWL 
SHLQVCANHT LTSATVVVAR CGPAAKKDQF EIALRWQPLP AEQAREQLIA LQALACQGLS 
QCWPVPPMSG WAYANANNKL AGRGEEAFRQ SWSGGFNVQG ERERAEMQLC FGLNCEASEL 
LNSAGFEQAN TSLYGPLVEA LAI