Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_09331 |
Symbol | ispA |
ID | 4776287 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 845954 |
End bp | 846874 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640086442 |
Product | polyprenyl synthetase |
Protein accession | YP_001016949 |
Protein GI | 124022642 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0142] Geranylgeranyl pyrophosphate synthase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.47365 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACGAGA CAAGGTTCAT GGCGGCGGCG GTCAGCACCT TCTTCGATTT CCCCGCCTAT TTGGCTGCGG CCAAAGCCAG CGTTGAAGAG GCTTTGGATG ATTCGCTTGG CCCTGAGCGT CCTGAGCAAC TCAGGGAGGC CATGCGCTAC TCCCTTTTGG CGGGTGGTAA GCGTTTACGC CCCATCCTTT GCATAGCAGC TTGCGAACTT GCTGGAGGTG AACCGACACA GGCTCTGCCG ACAGCAGTGG CTTTGGAAAT GATTCACACG ATGTCGCTGA TTCATGACGA TCTCCCCGCC ATGGATAACG ACGATTTACG CCGCGGTCGT CCCACCAATC ACAAGGTTTA TGGAGACGCG GTTGCCATTC TCGCGGGTGA TGCGCTGCTT ACACGTTCCT TTGAGATGGT TGCCTTGCGC AGCAAGGGTG TTGCGCCTGA GCGGCTGTTG AAGGTTGTTG GCGAGCTTTC TCTGGTTGCT GGTGCTCCTG GTTTAGTGGG GGGGCAGGTT GTAGATCTGG AGTGTGAGGG CAAAGAGGTG GATCTGGAGA CTTTGGAGTT CATTCATCTC CATAAGACCG GGGCCTTGCT GAGTGCTTGT GTGATCTGCG GAGCGTTGAT TGGTGGAGCA GAAGACGATT TGATTGATGC GCTACGCATC TATGCAAGAG GGATTGGTTT GGCGTTTCAG ATCATTGATG ACATCCTTGA TGTAACGGCG AGCAGCGATG TTCTTGGCAA AACTGCTGGC AAGGATCTGC TTGCCGATAA GACCACGTAT CCCAAATTGT TGGGTCTAGA GGAATCCCGC CGGCGTGCAG AACTCCTTGT GAGCGAAGCC AAGGCAGCAT TAGACCCTTG GCAATCTTCT GCTGCACCTT TGCTGGCACT AGCCGATTAC ATCACCAGCC GCGATCGATG A
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Protein sequence | MNETRFMAAA VSTFFDFPAY LAAAKASVEE ALDDSLGPER PEQLREAMRY SLLAGGKRLR PILCIAACEL AGGEPTQALP TAVALEMIHT MSLIHDDLPA MDNDDLRRGR PTNHKVYGDA VAILAGDALL TRSFEMVALR SKGVAPERLL KVVGELSLVA GAPGLVGGQV VDLECEGKEV DLETLEFIHL HKTGALLSAC VICGALIGGA EDDLIDALRI YARGIGLAFQ IIDDILDVTA SSDVLGKTAG KDLLADKTTY PKLLGLEESR RRAELLVSEA KAALDPWQSS AAPLLALADY ITSRDR
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