Gene P9303_09301 details

Gene Information

• Locus tag: P9303_09301
• Symbol: rluA
• ID: 4777588
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 842002
• End bp: 842625
• Gene Length: 624 bp
• Protein Length: 207 aa
• Translation table: 11
• GC content: 50%
• IMG OID: 640086439
• Product: putative pseudouridylate synthase
• Protein accession: YP_001016946
• Protein GI: 124022639
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0564] Pseudouridylate synthases, 23S RNA-specific
• TIGRFAM ID: [TIGR00005] pseudouridine synthase, RluA family

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 11
• Fosmid unclonability p-value: 0.47365
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGAGGGTTT TATTTCAGGA TTCCTGGCTA ATAGCTGTGG AGAAGCCACC AGGCTTATTG 
AGTCAGCCTG GTCTTGGTGT TGATCAGCAG GATTCTCTGA TTGGTCGCTT GCAGTTTTTT 
GACTCTGAGC TGCGATTGGT GCATCGCCTT GATCGAGACA CCTCAGGGTT GTTGTTGTTG 
GCGCGAGGGG CGGAGAGCTT GCGGCGTTGC AGCATGCTTT TTTCAGCACG TCGAGTGCGC 
AAGCTTTATT TGGCAGTGGT GGTTGGCCGG ATGAATCGCA ATGCTGGAAC GATCAGCTTC 
CCGATGGCGC GGCTGCAGAA GAATCCGCCT CTATATGGCA AGCATTCGCA AGGAAAAGAA 
AGCCGATCCC AATGGAGGGT TAGAAGCTGC CACGCAAACG GCTCAACGTT ATGGCTTTGG 
CCCTTGACAG GTCGATCCCA TCAATTGCGC GCACATTTAG CAAGTGTTGG ACATCCGATT 
TTGGGTGATC CGATTTATGG CAAAAAAGTT TTCTTTGAAA GGATGCATCT ACATTCGACA 
GCCTTGAGCT TTCGGCATCC TTTTACAGGT CTGAGGCTTC GTCTACGAAG TCGGGCTCCA 
TTCCTTGGAG CTCAGGAAAA TTAA 

 

Protein sequence

MRVLFQDSWL IAVEKPPGLL SQPGLGVDQQ DSLIGRLQFF DSELRLVHRL DRDTSGLLLL 
ARGAESLRRC SMLFSARRVR KLYLAVVVGR MNRNAGTISF PMARLQKNPP LYGKHSQGKE 
SRSQWRVRSC HANGSTLWLW PLTGRSHQLR AHLASVGHPI LGDPIYGKKV FFERMHLHST 
ALSFRHPFTG LRLRLRSRAP FLGAQEN