| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_08431 |
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| Symbol | psbD |
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| ID | 4776068 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 765806 |
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| End bp | 766891 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640086352 |
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| Product | photosystem II PsbD protein (D2) |
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| Protein accession | YP_001016859 |
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| Protein GI | 124022552 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | [TIGR01152] Photosystem II, DII subunit (also called Q(A)) |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGGCAGA ACCGCACCGT TTTTTTTCCC ATGACGATCG CTGTAGGACG CGCGCCTCAG
CGGGGATGGT TTGACGTCCT CGATGATTGG CTCAAGCGCG ACCGCTTCGT TTTTGTTGGC
TGGTCTGGCC TCCTCTTGTT CCCTACGGCC TATTTGGCCC TAGGAGGCTG GTTTACCGGC
ACCACCTTCG TTACCTCCTG GTACACCCAC GGCATTGCAA GTTCCTATCT GGAAGGCTGC
AATTTCCTTA GCGCCGCTGT AAGCACCCCC GCAGATGCGA TGGGTCATAG CTTGCTGCTG
CTATGGGGCC CTGAAGCTCA GGGTGATTTC GTGCGCTGGT GTCAGCTCGG TGGCCTCTGG
ACCTTCGTAG CCCTTCACGG CTCCTTCGCT CTGATCGGCT TCATGCTGAG ACAGTTCGAG
ATTGCCCGTT TGGTTGGCAT ACGCCCCTAC AACGCACTTG CCTTCTCAGG CCCAGTCGTT
GTCTTTCTGG CGTGTTTCCT CATTTACCCC CTAGGACAAC ACAGCTGGTT CTTTGCTCCC
TCGTTTGGGG TAGCAGCAAT CTTCCGCTTC ATTCTCTTCT TGCAGGGCTT CCATAACTGG
ACTCTGAATC CCTTCCACAT GATGGGAGTA GCAGGAATCC TCGGTGGTGC CTTGCTTTGT
GGCATCCATG GGGCAACGGT GCAGAACACC TTGTTCGAGG ATGGCGCTAT GTCAAACACC
TTTAAAGGGT TTGATCCCAC CCAGGAAGAA GAGACCTATT CGATGGTCAC CGCCAACCGC
TTCTGGAGCC AGATCTTCGG AATCGCCTTC TCCAACAAGC GCTGGCTGCA CTTCTTCATG
CTGTTCGTGC CTGTCATGGG CATGTGGACG CCTTCGGTTG GCATCGTTGG CTTAGCAGTC
AACCTGCGTG CCTACGACTT CGTGTCGCAG GAAGTACGCG CCGCTGAAGA CCCCGAATTC
GAGACCTTCT ACACCAAGAA CGTTCTTCTT AACGAAGGTA TCCGAGCCTG GATGTCCGTT
GCGGACCAAC CTCACGAAAA CTTTGTATTC CCTGAAGAGG TAATGCCACG TGGAAACGCC
CTTTAA
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| Protein sequence | MRQNRTVFFP MTIAVGRAPQ RGWFDVLDDW LKRDRFVFVG WSGLLLFPTA YLALGGWFTG
TTFVTSWYTH GIASSYLEGC NFLSAAVSTP ADAMGHSLLL LWGPEAQGDF VRWCQLGGLW
TFVALHGSFA LIGFMLRQFE IARLVGIRPY NALAFSGPVV VFLACFLIYP LGQHSWFFAP
SFGVAAIFRF ILFLQGFHNW TLNPFHMMGV AGILGGALLC GIHGATVQNT LFEDGAMSNT
FKGFDPTQEE ETYSMVTANR FWSQIFGIAF SNKRWLHFFM LFVPVMGMWT PSVGIVGLAV
NLRAYDFVSQ EVRAAEDPEF ETFYTKNVLL NEGIRAWMSV ADQPHENFVF PEEVMPRGNA
L
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