Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_07591 |
Symbol | |
ID | 4778098 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 699121 |
End bp | 699786 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 640086268 |
Product | Short-chain dehydrogenase/reductase (SDR) superfamily protein |
Protein accession | YP_001016775 |
Protein GI | 124022468 |
COG category | [R] General function prediction only |
COG ID | [COG0300] Short-chain dehydrogenases of various substrate specificities |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.122507 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGCGACCT ATCTGATCAC AGGAACGAAT CGCGGCATTG GCTATGAATA TTGTCGTCAG CTTCATGCAC GTGGTGACGT GGTTGTGGCT GCATGCCGTA AGCCTTCGCC GCAATTGGAA GGCTTAGGCG TGCGTATTGA GGCCGGGGTA GAGATCACTT CAGATGGATC GATTGCGCGC TTGAAGGAAC GGCTTCGCAG CTTGCCGATA GATGTGCTGA TCCACAATGC CGGCATTTTG GAAAGCACAA ATTTGAAAGA TTTTGATCCC GAGAGCGTTC GTCGTCAGTT CGAGGTCAAC GCCATTGGGC CATTACGTGT CACACATGCT CTTTTGGATC ATCTACTTCC TGGAGCCAAA GTTATTTTGA TGACTAGCCG AATGGGCTCG ATCGATGACA ACAGTTCCGG CGGTTCTTAT GGCTACAGGA TGTCGAAGGT GGCTTTGTGT ATGGCAGGAA AGTCATTAGC TATCGACCTT AAATCTCAAG GCATTGCCGT GGCGCTTCTT CATCCAGGGC TTGTGCGTAC CCGCATGACA GGATTCACTG CTCAAGGCAT CACTCCAGAA GAGTCGGTTG ATGGCTTGTT GGCCCGTATT GACAATCTCA ATTTGGAAAA CTCAGGCACT TTTTGGCATG CCAATGGGGA GATTCTTCCT TGGTAA
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Protein sequence | MATYLITGTN RGIGYEYCRQ LHARGDVVVA ACRKPSPQLE GLGVRIEAGV EITSDGSIAR LKERLRSLPI DVLIHNAGIL ESTNLKDFDP ESVRRQFEVN AIGPLRVTHA LLDHLLPGAK VILMTSRMGS IDDNSSGGSY GYRMSKVALC MAGKSLAIDL KSQGIAVALL HPGLVRTRMT GFTAQGITPE ESVDGLLARI DNLNLENSGT FWHANGEILP W
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