Gene P9303_06021 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagP9303_06021 
Symbol 
ID4777083 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. MIT 9303 
KingdomBacteria 
Replicon accessionNC_008820 
Strand
Start bp568343 
End bp570508 
Gene Length2166 bp 
Protein Length721 aa 
Translation table11 
GC content56% 
IMG OID640086109 
Productpolynucleotide phosphorylase/polyadenylase 
Protein accessionYP_001016619 
Protein GI124022312 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) 
TIGRFAM ID[TIGR03591] polyribonucleotide nucleotidyltransferase 


Plasmid Coverage information

Num covering plasmid clonesn/a 
Plasmid unclonability p-valuen/a 
Plasmid hitchhikingn/a 
Plasmid clonabilityn/a 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.293037 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAAGGTC AGACACAGTC GATCTCCTTT GATGGTCGGG AGATTCGGCT GACCACAGGG 
CGATATGCCC CCCAGGCCGG TGGTTCCGTG ATGATGGAAT GCGGCGACAC CTCCGTCCTG
GTAACCGCCA CCAGATCGAC AGGCCGCGAA GGCATCGATT TTCTTCCCCT GATTTGCGAC
TACGAGGAGC GGCTCTATGC AGCTGGCCGC ATTCCTGGCA GTTTCATGCG ACGTGAAGGA
CGCCCGCCAG AGAGAGCCAC GCTGATCGCT CGTCTAATCG ACCGCCCCAT GAGGCCCTTA
TTCCCTAGCT GGATGAGGGA CGACCTTCAG ATCGTGGCAA CATGCCTCTC TCTCGATGAA
CGGGTTCCAG CAGATGTGCT GGCCGTTACG GGAGCTTCCA TGGCCACCTT GCTAGCAGGC
ATCCCCTTCC AGGGGCCAAT GGCTGCAGTA AGGGTAGGGC TTCTCGGTGA TGATTTCGTT
CTGAATCCCA GCTATCGAGA AATCGAACGT GGCGATCTCG ATCTCGTGGT AGCTGGCACC
CCAGATGGGG TTGTCATGGT TGAAGCCGGT GCAAACCAGC TGCCAGAAGG GGACGTCATC
GAAGCCATCG ACTTTGGCTA TGAAGCCGTC TGCGAATTAA TCAAGGCACA GCAATCCATC
CTCAAGGATG CAGGGATTAA GCAGGTACAG CCGGAACCCC CCACTCAAGA CACCAAGCTT
TCGACTTATC TGGAAAAAAA TTGCAGCAAG AGCATCGGGG AAGTGCTGAA GCAATTTGAG
CAAACCAAAG CTGAACGCGA TAGCAAGTTG GATGCCATCA AAGCGAAAAC AGCTGAAGCC
ATTGACAGCC TCAAAGAAGA CGATGCCGTT CGCAAGTCAG TGAATGCCAA CAGCAAAGTC
TTGAGCAACA ACTTCAAGGC GCTCACCAAA AAATTGATGC GTGAGCAGAT CATCAAACAA
GGCAAACGCG TCGATGGTCG CAAGCTTGAT GAGGTCCGCA CCATTACTTC CGCCGCAGGT
GTGCTGCCAA AACGCGTGCA CGGATCCGGA CTCTTCCAAC GCGGACTCAC CCAGGTGCTG
TCCACCGCCA CCCTGGGCAC ACCCAGCGAT GCCCAGGAGA TGGATGACCT CAACCCTGGA
CCTGAGAAGA CCTATCTACA CCACTACAAC TTCCCCCCCT ATTCCGTTGG CGAGACACGT
CCAATGCGAT CGCCCGGGCG CCGTGAGGTA GGCCATGGTT CCCTCGCTGA ACGCGCCATC
ATTCCAGTAC TGCCTCCCAA GGACACCTTC CCTTACGTGC TCAGGGTGGT GAGCGAAGTC
CTCAGCTCCA ATGGGTCCAC CTCGATGGGC TCGGTCTGCG GCAGCACCCT GGCCCTCATG
GATGCAGGTG TTCCACTGAA GGCTCCAGTC AGCGGAGCCG CCATGGGCTT GATCAAGGAA
GATGCTGAGA TTCGCATCCT CACTGACATC CAGGGAATCG AGGACTTCCT CGGTGATATG
GACTTCAAAG TGGCTGGAAC AAAAGATGGC ATCACAGCCC TGCAGATGGA CATGAAGATC
ACCGGCCTTC CTGTAAAAAC CATTGCAGAA GCTGTCAATC AGGCCCGCCC TGCCAGGATC
CATATCCTCG AGAAGATGCT GGAAGCCATT GACGCTCCCA GGACTAGCCT CTCTCCCCAT
GCCCCGCGCC TGCTGAGCTT CAGAATCGAT CCAGAACTGA TCGGCACAGT GATTGGACCG
GGTGGTCGCA CAATCAAGGG CATCACAGAA CGCACGAACA CCAAGATCGA CATTGAAGAC
GGTGGCATCG TCACGATTGC TTCTCATGAC GGGGCTGCTG CAGAGGCAGC CCAACGCATC
ATCGAAGGAC TCACCCGCAA AGTAAACGAG GGGGAAGTGT TCAGCGGAAC CATCACAAGG
ATCATTCCGA TCGGGGCTTT CGTAGAGATC CTGCCCGGCA AAGAGGGCAT GATCCACATC
TCCCAGCTGT CAGAGGCTCG CGTGGAGAAG GTCGACGACG TCGTGAAAGT AGGTGATGAG
GTGACAGTAC GAATACGAGA GATTGACAAT CGTGGCCGTA TCAACCTCAC ACTCAGAGGC
GTCCCTCAGA ACGGCGAAGA GACTCAATCA GAGCCAGCTC CAACTCCTGT AGCCCCTCTC
AACTGA
 
Protein sequence
MQGQTQSISF DGREIRLTTG RYAPQAGGSV MMECGDTSVL VTATRSTGRE GIDFLPLICD 
YEERLYAAGR IPGSFMRREG RPPERATLIA RLIDRPMRPL FPSWMRDDLQ IVATCLSLDE
RVPADVLAVT GASMATLLAG IPFQGPMAAV RVGLLGDDFV LNPSYREIER GDLDLVVAGT
PDGVVMVEAG ANQLPEGDVI EAIDFGYEAV CELIKAQQSI LKDAGIKQVQ PEPPTQDTKL
STYLEKNCSK SIGEVLKQFE QTKAERDSKL DAIKAKTAEA IDSLKEDDAV RKSVNANSKV
LSNNFKALTK KLMREQIIKQ GKRVDGRKLD EVRTITSAAG VLPKRVHGSG LFQRGLTQVL
STATLGTPSD AQEMDDLNPG PEKTYLHHYN FPPYSVGETR PMRSPGRREV GHGSLAERAI
IPVLPPKDTF PYVLRVVSEV LSSNGSTSMG SVCGSTLALM DAGVPLKAPV SGAAMGLIKE
DAEIRILTDI QGIEDFLGDM DFKVAGTKDG ITALQMDMKI TGLPVKTIAE AVNQARPARI
HILEKMLEAI DAPRTSLSPH APRLLSFRID PELIGTVIGP GGRTIKGITE RTNTKIDIED
GGIVTIASHD GAAAEAAQRI IEGLTRKVNE GEVFSGTITR IIPIGAFVEI LPGKEGMIHI
SQLSEARVEK VDDVVKVGDE VTVRIREIDN RGRINLTLRG VPQNGEETQS EPAPTPVAPL
N