Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_06021 |
Symbol | |
ID | 4777083 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 568343 |
End bp | 570508 |
Gene Length | 2166 bp |
Protein Length | 721 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640086109 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001016619 |
Protein GI | 124022312 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.293037 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCAAGGTC AGACACAGTC GATCTCCTTT GATGGTCGGG AGATTCGGCT GACCACAGGG CGATATGCCC CCCAGGCCGG TGGTTCCGTG ATGATGGAAT GCGGCGACAC CTCCGTCCTG GTAACCGCCA CCAGATCGAC AGGCCGCGAA GGCATCGATT TTCTTCCCCT GATTTGCGAC TACGAGGAGC GGCTCTATGC AGCTGGCCGC ATTCCTGGCA GTTTCATGCG ACGTGAAGGA CGCCCGCCAG AGAGAGCCAC GCTGATCGCT CGTCTAATCG ACCGCCCCAT GAGGCCCTTA TTCCCTAGCT GGATGAGGGA CGACCTTCAG ATCGTGGCAA CATGCCTCTC TCTCGATGAA CGGGTTCCAG CAGATGTGCT GGCCGTTACG GGAGCTTCCA TGGCCACCTT GCTAGCAGGC ATCCCCTTCC AGGGGCCAAT GGCTGCAGTA AGGGTAGGGC TTCTCGGTGA TGATTTCGTT CTGAATCCCA GCTATCGAGA AATCGAACGT GGCGATCTCG ATCTCGTGGT AGCTGGCACC CCAGATGGGG TTGTCATGGT TGAAGCCGGT GCAAACCAGC TGCCAGAAGG GGACGTCATC GAAGCCATCG ACTTTGGCTA TGAAGCCGTC TGCGAATTAA TCAAGGCACA GCAATCCATC CTCAAGGATG CAGGGATTAA GCAGGTACAG CCGGAACCCC CCACTCAAGA CACCAAGCTT TCGACTTATC TGGAAAAAAA TTGCAGCAAG AGCATCGGGG AAGTGCTGAA GCAATTTGAG CAAACCAAAG CTGAACGCGA TAGCAAGTTG GATGCCATCA AAGCGAAAAC AGCTGAAGCC ATTGACAGCC TCAAAGAAGA CGATGCCGTT CGCAAGTCAG TGAATGCCAA CAGCAAAGTC TTGAGCAACA ACTTCAAGGC GCTCACCAAA AAATTGATGC GTGAGCAGAT CATCAAACAA GGCAAACGCG TCGATGGTCG CAAGCTTGAT GAGGTCCGCA CCATTACTTC CGCCGCAGGT GTGCTGCCAA AACGCGTGCA CGGATCCGGA CTCTTCCAAC GCGGACTCAC CCAGGTGCTG TCCACCGCCA CCCTGGGCAC ACCCAGCGAT GCCCAGGAGA TGGATGACCT CAACCCTGGA CCTGAGAAGA CCTATCTACA CCACTACAAC TTCCCCCCCT ATTCCGTTGG CGAGACACGT CCAATGCGAT CGCCCGGGCG CCGTGAGGTA GGCCATGGTT CCCTCGCTGA ACGCGCCATC ATTCCAGTAC TGCCTCCCAA GGACACCTTC CCTTACGTGC TCAGGGTGGT GAGCGAAGTC CTCAGCTCCA ATGGGTCCAC CTCGATGGGC TCGGTCTGCG GCAGCACCCT GGCCCTCATG GATGCAGGTG TTCCACTGAA GGCTCCAGTC AGCGGAGCCG CCATGGGCTT GATCAAGGAA GATGCTGAGA TTCGCATCCT CACTGACATC CAGGGAATCG AGGACTTCCT CGGTGATATG GACTTCAAAG TGGCTGGAAC AAAAGATGGC ATCACAGCCC TGCAGATGGA CATGAAGATC ACCGGCCTTC CTGTAAAAAC CATTGCAGAA GCTGTCAATC AGGCCCGCCC TGCCAGGATC CATATCCTCG AGAAGATGCT GGAAGCCATT GACGCTCCCA GGACTAGCCT CTCTCCCCAT GCCCCGCGCC TGCTGAGCTT CAGAATCGAT CCAGAACTGA TCGGCACAGT GATTGGACCG GGTGGTCGCA CAATCAAGGG CATCACAGAA CGCACGAACA CCAAGATCGA CATTGAAGAC GGTGGCATCG TCACGATTGC TTCTCATGAC GGGGCTGCTG CAGAGGCAGC CCAACGCATC ATCGAAGGAC TCACCCGCAA AGTAAACGAG GGGGAAGTGT TCAGCGGAAC CATCACAAGG ATCATTCCGA TCGGGGCTTT CGTAGAGATC CTGCCCGGCA AAGAGGGCAT GATCCACATC TCCCAGCTGT CAGAGGCTCG CGTGGAGAAG GTCGACGACG TCGTGAAAGT AGGTGATGAG GTGACAGTAC GAATACGAGA GATTGACAAT CGTGGCCGTA TCAACCTCAC ACTCAGAGGC GTCCCTCAGA ACGGCGAAGA GACTCAATCA GAGCCAGCTC CAACTCCTGT AGCCCCTCTC AACTGA
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Protein sequence | MQGQTQSISF DGREIRLTTG RYAPQAGGSV MMECGDTSVL VTATRSTGRE GIDFLPLICD YEERLYAAGR IPGSFMRREG RPPERATLIA RLIDRPMRPL FPSWMRDDLQ IVATCLSLDE RVPADVLAVT GASMATLLAG IPFQGPMAAV RVGLLGDDFV LNPSYREIER GDLDLVVAGT PDGVVMVEAG ANQLPEGDVI EAIDFGYEAV CELIKAQQSI LKDAGIKQVQ PEPPTQDTKL STYLEKNCSK SIGEVLKQFE QTKAERDSKL DAIKAKTAEA IDSLKEDDAV RKSVNANSKV LSNNFKALTK KLMREQIIKQ GKRVDGRKLD EVRTITSAAG VLPKRVHGSG LFQRGLTQVL STATLGTPSD AQEMDDLNPG PEKTYLHHYN FPPYSVGETR PMRSPGRREV GHGSLAERAI IPVLPPKDTF PYVLRVVSEV LSSNGSTSMG SVCGSTLALM DAGVPLKAPV SGAAMGLIKE DAEIRILTDI QGIEDFLGDM DFKVAGTKDG ITALQMDMKI TGLPVKTIAE AVNQARPARI HILEKMLEAI DAPRTSLSPH APRLLSFRID PELIGTVIGP GGRTIKGITE RTNTKIDIED GGIVTIASHD GAAAEAAQRI IEGLTRKVNE GEVFSGTITR IIPIGAFVEI LPGKEGMIHI SQLSEARVEK VDDVVKVGDE VTVRIREIDN RGRINLTLRG VPQNGEETQS EPAPTPVAPL N
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