| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_06001 |
|---|
| Symbol | |
|---|
| ID | 4776815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | - |
|---|
| Start bp | 566515 |
|---|
| End bp | 567384 |
|---|
| Gene Length | 870 bp |
|---|
| Protein Length | 289 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 640086107 |
|---|
| Product | putative tetrapyrrole methylase family protein |
|---|
| Protein accession | YP_001016617 |
|---|
| Protein GI | 124022310 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0313] Predicted methyltransferases |
|---|
| TIGRFAM ID | [TIGR00096] probable S-adenosylmethionine-dependent methyltransferase, YraL family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 0.347994 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGAGCCAGC GAGAGGAACC AGCACCAGGG GTGCTCTATG TGGTTGGGAC GCCCATTGGT
CACCTCGGAG ATCTTTCCCC CAGAGCACGC TCTGTGCTCA AGAATGTCTC GGCCATCGCC
TGTGAAGACA CACGCCATAG CGGCCATCTA CTCAACAGCC TGGGCGCGCA GAGTCAACGT
TTCAGCTTCC ACCAACACAA CACCAAAGCT CGCCTCCCCC AACTGCTTCA ACTGCTCAAC
GAAGGGCAAA GCCTGGCTTT AATCAGTGAT GCCGGGCTGC CGGGCATCAG CGATCCCGGC
GAACAACTCG TTGCAGCCGC TAAGGCAGCT GGGCACCAGG TGATCTGTAT TCCCGGCCCC
TGTGCAGCAA CAACAGCCTT AGTGAGCAGC GGACTTCCAT CTGGCCGCTT TTGTTTTGAA
GGTTTTCTAG CCTCCAGAGG CAAGGAACGA CGGCAGCAGC TGTCAGCGGT CGCCAGCGAG
ACCCGAACAA CCATTCTTTA CGAAGCGCCA CACCGGCTGG TGCAACTGCT GAAAGAATTG
GCGCAACTTT GCGGGGATGA GCGGCCCTTA CAGGTGGCCA GGGAACTCAC CAAACGCCAT
GAACAACAAA TAGGGCCAAC GATCGCAGCA GCCCTACAGC ATTTTCTTGA ACACAAGCCT
CTAGGGGAAT GCACTCTTGT TCTAGGAGGT GCTCCACTTT CAGGACCAGA TCAGCAAAGT
GACGCGCATT GGCGAGCGGA ATTGACAGCG TTGATGGCCA GTGGAGCAAG TGCAAGCGAT
GCCGCTCGAC AACTCGCTCA ACAGTCAGGG CAATCCAGAA GGGCTCTTTA TGCCCTGGTA
CACCAAATGG TAGAAAACGA GAGCGAATGA
|
|---|
| Protein sequence | MSQREEPAPG VLYVVGTPIG HLGDLSPRAR SVLKNVSAIA CEDTRHSGHL LNSLGAQSQR
FSFHQHNTKA RLPQLLQLLN EGQSLALISD AGLPGISDPG EQLVAAAKAA GHQVICIPGP
CAATTALVSS GLPSGRFCFE GFLASRGKER RQQLSAVASE TRTTILYEAP HRLVQLLKEL
AQLCGDERPL QVARELTKRH EQQIGPTIAA ALQHFLEHKP LGECTLVLGG APLSGPDQQS
DAHWRAELTA LMASGASASD AARQLAQQSG QSRRALYALV HQMVENESE
|
|---|
| |