| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_05621 |
|---|
| Symbol | pyrF |
|---|
| ID | 4777171 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 543286 |
|---|
| End bp | 544026 |
|---|
| Gene Length | 741 bp |
|---|
| Protein Length | 246 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640086067 |
|---|
| Product | orotidine 5'-phosphate decarboxylase |
|---|
| Protein accession | YP_001016579 |
|---|
| Protein GI | 124022272 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
|---|
| TIGRFAM ID | [TIGR01740] orotidine 5'-phosphate decarboxylase, subfamily 1 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGATGACCT CGCCATTGAC TCCTGCCGAT CAACTGATCA TTGCTCTTGA TGGCATGGAG
CGGGCTGAGG CCCTTGCATT CATCTCAAAG TTGCCAGAGG TCAGTTGGGT CAAGGTGGGC
CTGGAACTGT TTGTTAGTGC GGGGCCAGAG GTTTTGGCTG ATCTCAGGGA GCAAGGGTTG
CGGATATTTC TTGATCTCAA GTTTCACGAT ATCCCTGCCA CCATGGCAGG AGCTTGTCGC
CGAGCGGCGA GCTTTGGCGC TGAGTTGATC ACGGTGCATG CCTGTGCTGG CCGTGCTGCC
CTTGATGAAG CTCAGACTGC TGCTTGCGAG GGGGCTGCGG AGGTTGGCTT GTCAGCACCC
CGGCTGTTGG CCGTCACTGT GCTCACCAGT TGGGATCAGA AGCGTCTAGC GAATGAGCTG
TGCATTCCTC AGTCTCTTCA GGCCAGGGTG GAGTGGTTGG CTGAGTTGGC AGCGGAGTCA
GGGTTAGGCG GCTGCGTGTG TTCTCCCTGG GAAGTAAGCG GCTTACGCCG ACTTCATCCC
TCGCCATTTG AGTTAGTGAC TCCTGGCATT CGCCCCTCGG GGGCTGAATT GGCGGATCAG
GTCAGGGTCA TGAGTCCTGC AGCGGCGCTG AATGCAGGAG CTTCCCGTTT GGTAATCGGC
AGGCCGATTA CCCGTGCTGT TGATCCGGCA GAGGCGTTTG CACGCTGCTG CTTTGAGATT
GAACAGCGTC AGCTGGACTG A
|
|---|
| Protein sequence | MMTSPLTPAD QLIIALDGME RAEALAFISK LPEVSWVKVG LELFVSAGPE VLADLREQGL
RIFLDLKFHD IPATMAGACR RAASFGAELI TVHACAGRAA LDEAQTAACE GAAEVGLSAP
RLLAVTVLTS WDQKRLANEL CIPQSLQARV EWLAELAAES GLGGCVCSPW EVSGLRRLHP
SPFELVTPGI RPSGAELADQ VRVMSPAAAL NAGASRLVIG RPITRAVDPA EAFARCCFEI
EQRQLD
|
|---|
| |