Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_05311 |
Symbol | psbV |
ID | 4777252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 516648 |
End bp | 517160 |
Gene Length | 513 bp |
Protein Length | 170 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 640086036 |
Product | cytochrome c-550 |
Protein accession | YP_001016548 |
Protein GI | 124022241 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR03045] cytochrome c-550 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
| |
Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCCTCTC TCTTTGCATC CCTGGGACGG TCCCTGATCA AACTATTGAT CGTTTTGCCC GTAATAATTG GCTTGAGCAT TAGCTCTCCG GCCATGGCTG CCCAATGGGA TGCCGAGACC CTCACCGTTC CCGCAGGCTC AGGCGGACAG CAGGTGACCT TCAGCGAGTC AGAAATCAAG AGCGCTAGCA AGCTCTTCAA AAGCAACTGC GCCACCTGCC ATAACCAAGG CGTCACCAAG ACCAATCAAA ACGTTGGCCT CGACCTTGAG GCTCTCTCAC TGGCATCACC TGCTCGTGAC AACGTGGACG GCCTGGTCGA ATTCCTGAAA AATCCCATGT CATATGACGG GGAATACAGC ATTGCCGACA CCCACCCAGG CATCAGCAGC AGCGATGTCT ACGTTCAGAT GCGCACGCTC AACGATGAGG ACCTGCGCCT AATCGCCGGT TACATCCTCA CGGCTGAGAA AGTACAGGGC GACCAATGGG GTGGTGGCAA GATCTACTTC TGA
|
Protein sequence | MASLFASLGR SLIKLLIVLP VIIGLSISSP AMAAQWDAET LTVPAGSGGQ QVTFSESEIK SASKLFKSNC ATCHNQGVTK TNQNVGLDLE ALSLASPARD NVDGLVEFLK NPMSYDGEYS IADTHPGISS SDVYVQMRTL NDEDLRLIAG YILTAEKVQG DQWGGGKIYF
|
| |