| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_05021 |
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| Symbol | atpD |
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| ID | 4777990 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 493629 |
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| End bp | 495227 |
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| Gene Length | 1599 bp |
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| Protein Length | 532 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 640086006 |
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| Product | F0F1 ATP synthase subunit beta |
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| Protein accession | YP_001016519 |
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| Protein GI | 124022212 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGTGCC GACTAGTCGA TACCTGTGCG GGTCACCGAA CCCTGAGAAG ATCTCGCCAT
GCAGTGGTAA TGTTGCGCCG CTCTGTAAGG GCATGCGTTC GACACGCAAC CCCTGCAAAA
CTCTATTTTC TTATGGCCGC TGCAGCTACC GCCACCGCTG GCACCAAGGG CGTTGTTCGC
CAGGTGATTG GCCCGGTTCT GGATGTGGAA TTCCCTGCCG GCAAGCTGCC CAAAATCCTC
AATGCCCTTC GTATTGATGG CAAGAACCCA TCCGGTCAGC ACATTGCCAT CACTGCCGAA
GTGCAGCAGC TCCTCGGCGA TCATCGAGTA AGGGCAGTGG CAATGAGCAG CACCGATGGT
CTGGTTCGTG GCATGGAAGC CCTCGACACC GGCTCTGCAA TTTCCGTGCC CGTTGGTGAA
GCCACTCTGG GCAGGATCTT CAACGTGCTC GGCGAACCAG TTGATGAGCA GGGTCCTGTT
ACAACCGATG CAACTGCTCC GATTCACCGG CCAGCGCCAA AACTCACTGA GCTAGAGACC
AAACCAACAG TTTTTGAAAC TGGCATCAAG GTGATTGATC TCTTGGCTCC CTACCGTCAA
GGCGGCAAGG TTGGCCTCTT CGGTGGTGCC GGTGTGGGCA AGACCGTGCT GATTCAGGAG
CTGATCAATA ACATCGCCAA AGAGCACGGT GGTGTGTCTG TCTTTGGTGG GGTGGGCGAG
CGTACCCGTG AAGGCAACGA CCTCTACGAG GAATTCAAAG AATCCGGAGT GATCAACTCC
GACGACCTGT CGAAGTCGAA GGTAGCTCTT TGCTTCGGGC AGATGAATGA GCCCCCTGGC
GCCCGGATGC GCGTGGGTCT TTCAGCTCTC ACCATGGCTG AGCACTTCCG CGACGTGAAC
AAGCAAGACG TGCTGCTGTT CATCGACAAC ATCTTCCGTT TTGTGCAGGC CGGATCAGAA
GTCTCTGCTC TATTGGGTCG CATGCCTTCC GCCGTGGGTT ACCAGCCCAC CCTTGGCACC
GATGTTGGTG CACTTCAAGA GCGCATCACA TCAACCCTAG AGGGATCGAT TACCTCGATT
CAGGCCGTCT ACGTTCCCGC AGATGACCTC ACCGACCCCG CACCAGCCAC AACATTTGCC
CACTTAGACG CCACAACTGT GCTGGCTCGT GCATTGGCCG CCAAGGGCAT TTACCCGGCT
GTGGATCCTT TGGATTCCAC CAGCACCATG CTTCAGCCAT CAGTTGTTGG CGATGAGCAT
TACCGCACAG CACGAAGCGT GCAGGCCACA CTGCAGCGCT ACAAGGAACT GCAAGACATC
ATTGCCATCC TTGGTCTCGA CGAACTCTCA GAAGATGATC GCCGCACAGT AGATCGTGCC
CGCAAGATTG AGAAGTTCCT TTCCCAGCCC TTCTTTGTCG CCGAGATTTT TACCGGCATG
TCCGGCAAGT ACGTCAAGCT GGAAGAAACC ATCGCCGGCT TCAATATGAT CCTGGCTGGT
GAACTAGACC ATCTACCTGA GCAAGCCTTT TACCTGGTTG GCAACATCGA CGAGGTCAAG
GCTAAGGCCG AGAAGATAGC TTCAGAAGCA AAGGGTTAA
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| Protein sequence | MLCRLVDTCA GHRTLRRSRH AVVMLRRSVR ACVRHATPAK LYFLMAAAAT ATAGTKGVVR
QVIGPVLDVE FPAGKLPKIL NALRIDGKNP SGQHIAITAE VQQLLGDHRV RAVAMSSTDG
LVRGMEALDT GSAISVPVGE ATLGRIFNVL GEPVDEQGPV TTDATAPIHR PAPKLTELET
KPTVFETGIK VIDLLAPYRQ GGKVGLFGGA GVGKTVLIQE LINNIAKEHG GVSVFGGVGE
RTREGNDLYE EFKESGVINS DDLSKSKVAL CFGQMNEPPG ARMRVGLSAL TMAEHFRDVN
KQDVLLFIDN IFRFVQAGSE VSALLGRMPS AVGYQPTLGT DVGALQERIT STLEGSITSI
QAVYVPADDL TDPAPATTFA HLDATTVLAR ALAAKGIYPA VDPLDSTSTM LQPSVVGDEH
YRTARSVQAT LQRYKELQDI IAILGLDELS EDDRRTVDRA RKIEKFLSQP FFVAEIFTGM
SGKYVKLEET IAGFNMILAG ELDHLPEQAF YLVGNIDEVK AKAEKIASEA KG
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