Gene P9303_04131 details

Gene Information

• Locus tag: P9303_04131
• Symbol: infB
• ID: 4778381
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 411288
• End bp: 414662
• Gene Length: 3375 bp
• Protein Length: 1124 aa
• Translation table: 11
• GC content: 59%
• IMG OID: 640085917
• Product: translation initiation factor IF-2
• Protein accession: YP_001016430
• Protein GI: 124022123
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0532] Translation initiation factor 2 (IF-2; GTPase)
• TIGRFAM ID: [TIGR00231] small GTP-binding protein domain; [TIGR00487] translation initiation factor IF-2

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGACCAGCA GCGGCAAAAT CAGAATTTAT GAGCTGTCCA AGGACCTAGG CCTTGAGAAC 
AAGGACGTGC TCCATGCCGC TGAGAAACTC TCAATTGCGG CCAAGAGCCA TAGCAGTTCC 
ATCAGTGACG ATGAAGCAAA GCGCATCCGT GGCCTGTTGC GCCAAGGCTC CGCTGCTAAT 
TCAGCTCCAC CAAGCAAGTC GGAACCTGGA AAGACAATTC TGTCGGTGAA AAAAGCAGCG 
CCCACTGCCA TTAAGGACGT TGCGCCACCA ATGCGAAAAG CTACAAGCAG CTCAGAGATC 
AGCCAGGTCA AGCCATCCGC GCCTGCAAAC CCCACACCAA CAAGCCCTGA ACGACTCTCA 
AGGGAATCGG TCGCTCATCC TGCTCCACCG ACTCGCCCAG TAAACCCCAC TACAACCCCG 
ACAAGCTCGC CACCAAAAAC AGCAGCTCGT CCTGTCAACG CTCCTATCAG TCGTCCAGCA 
ACCCCCAGCC GACCTAGCGC TCCTACACCA AGATCAGCAA ACAAACCCTC CTCCCCCGTA 
CCTCCAAGCA CGGGGAGCAA AGACCCACGT GCCGGTCAGA CGTCTACTTC GAGTAAAGCA 
ACCACCGTTA GTGGAGGAGG CCCTCGTCCC AAAATCATCT CTAGGCCACA ATCGCCAGCA 
GCGCCAGGAC GCAGCGCACC CCCGGCAAAG CCATCAATCC CATCTGATCG CAAAGCTCCA 
AAGCCAGAAC TGGTGGGACG CCCTAAACCC AAGCGTCCTG TCGTAGCCCC TCCGAGCCGA 
CCAGAGCCAG AGGGACAACG CCCTGACAAA AAACGACCCG GAATTAGTCC ACGACCGATC 
GGCGGACCAA ATCAGCGCGC TAACACGCCC CAGCGCCCCG GCGCCCCCAT AAGGCAAGGC 
AAAACCAGAC CAGGACAGCC TCGTTCTGCC GGCAACACCC TCGAATTAGT GGGCAAGCCC 
ATTCGGCGTG ATCGATCCGA CGCTGGCTCC GCAGGACGGG ATAGCAACAA CCGCCCAGGA 
GCCCCCACCC GCCCAGGCAT GCCTGCAGGC ATGCGCAAAC CGGTGGCACC TGGAGAGCTG 
ATGCAGCTTC AAAAGCCCAC CGGTCGACCT GGCACACCAC CGCCACGACG ACCGGACGGA 
ACCAGCGTCG GAACCCGCGG AGGATCCGAG GGAGCCACTC CACCTGTGGA ACGCCCTGCA 
TCACCCACAG CACCCAAAAG ACCTGGTCAC CGCCCCGCTC AAGCGCCTGC TGCCGGAGCC 
CCAAGGAGAC CCGGTAGACC GGACTGGGAC GACAGCGCCA AGCTTGAAGC CCTGCGCAAC 
AAGTCTCCCC AGAAGCAGCG CCAGAAGGTG CACATCATTG GGGAAAATGA TGATGCCCTC 
ACCGCAGAAA CAAGCGGCTA CGCAGGAGAA CAACAGGCCG TCGTACTGAC GGCCAGCCTG 
GCCCGGCCCG CCAAACCAAA ATCGCAGAAA AAGCCCGCCT CCAAACCCGT GGCGGCATTA 
CGCAAGCGCA AAAAAGAAAC CACCCGACAA AGGCAACGCC GACGGGCAAT GGAGCTACGT 
GCAGCCCGCG AAGCGAAGCA GGTCAGGCCA GAAATGCTGA TTGTTCCGGA GGCCAACCTC 
ACAGTGCAGG AGCTGGCAGA CATGCTCAGC ATTGAAAGCT CTGAGATCAT CAAATCCCTT 
TTCTTCAAAG GGATTACCGC CACAGTCACC CAGTCACTAG ATCTTCCCAC GATCGAAGCA 
GTGGCCGAGG AGTTCGGGGT ACCTGTCCTT CAGGACGACA TCGAGGAGGC AGCCAAAAAG 
ACAACGGAGA TGATTGAGGA GACTGATCTA GCCCACCTGA TCCGCCGCCC ACCTGTGGTG 
ACCGTGATGG GTCATGTCGA TCACGGCAAA ACCAGCCTGC TGGATGCAAT CCGCAAAGCC 
AGGGTTGCCG CGGTTGAAGC CGGAGGCATC ACCCAGCACA TCGGCGCCTA TCAGGTGGAG 
ATCGATCATG GCGGTCAGCC CCGCAAGATC ACATTCCTTG ACACACCAGG CCACCAGGCT 
TTCACTGCCA TGCGCGCCCG CGGCACCAAG GTCACGGACA TAGCAGTACT AGTGGTTGCT 
GCTGACGATG GTGTACGCCC TCAGACCCTG GAGGCCATCA GCCACGCACG CGCTGCCAAG 
GTTCCGATCA TTGTGGCGAT CAACAAAACG GACAAGGAGG GAGCCTCTCC AGAACGGGTC 
AAGCAGGAAC TTTCTGATCA GAACCTGCTC TCCGAAGAGT GGGGAGGTGA TGTGGTGATG 
GTTCCCGTAA GTGCCATCAA GGGCGAGAAC ATCGACAAAC TTCTCGAGAT GATTCTGCTG 
GTCACCGAAG TTGAGGATTT GCAGGCCAAC CCTGACCGTC TGGCCAAAGG CACCGTTATC 
GAGGCTCACC TAGACAAGGC CAAAGGGCCT GTTGCCACAT TGCTAATCCA GAACGGCACC 
CTTAAAACCG GAGATGTACT CGCCGCCGGC CCAGTGCTTG GCAAGGTGCG AGCCATGGTC 
GACGACAGCG GAGCCCGACT CAAACAAGCT GGTCCGGCTG ATGCCGTAGA GGCCCTCGGC 
TTCAGCGAAG TGCCAACAGC CGGAGATGAA TTTGAGGTCT ACCCAGATGA GAAGTCAGCA 
AGAGCCGTTG TGGGAGAACG CGCCTCCGAT GCCCGTGCCA CCAGGCTGGC CCAACAGATG 
GCCTCAAGGA GGGTGTCCCT CGCAGCCATG TCTGGGCAAG CAAGCGATGG CGAACTCAAG 
GAACTCAACC TGATTCTCAA AGCCGACGTT CAGGGCAGTG TGGAAGCCAT CCTGGGATCC 
TTGGAACAAT TGCCGAAGGA TGAGGTACAG GTTCGCGTGC TGCTCTCCGC GCCGGGTGAA 
ATCACCGAAA CTGATGTGGA TCTTGCGGCT GCATCCGGGG CTGTGATTGT GGGCTTTAAC 
ACATCCATGG CCTCTGGAGC CAAGCGGGCC GCGGATGCCA CGGGTGTAGA CGTTCGTGAT 
TACGACGTGA TCTACAAGCT TTTGGAAGAC ATCCAGATGG CTATGGAAGG TTTACTAGAG 
CCAGAGCTAG TGGAAGAATC GCTGGGGGAA GCAGAAGTGC GTGCCGTCTT TACCATCGGC 
AAGAGCGCCG TGGCGGGCTG TTACATCACC ACAGGCAAGC TGCAGCGCAA CTGCAGAGTG 
CGCGTACGGC GTGCCAAACA GGTGGTATTC GAAGGCGATC TCGACTCCCT ACGCCGCAAT 
AAAGACGACG TCAAGGAGGT GGCCACAGGA TTCGAGTGCG GCATCGGCTG TGATCGCTTT 
GCTAACTGGG AAGAACGCGA CATCATTGAA GCTCACAAAC TAGTGACCAA GCGACGCACG 
CTGAGTAGCT CATGA 

 

Protein sequence

MTSSGKIRIY ELSKDLGLEN KDVLHAAEKL SIAAKSHSSS ISDDEAKRIR GLLRQGSAAN 
SAPPSKSEPG KTILSVKKAA PTAIKDVAPP MRKATSSSEI SQVKPSAPAN PTPTSPERLS 
RESVAHPAPP TRPVNPTTTP TSSPPKTAAR PVNAPISRPA TPSRPSAPTP RSANKPSSPV 
PPSTGSKDPR AGQTSTSSKA TTVSGGGPRP KIISRPQSPA APGRSAPPAK PSIPSDRKAP 
KPELVGRPKP KRPVVAPPSR PEPEGQRPDK KRPGISPRPI GGPNQRANTP QRPGAPIRQG 
KTRPGQPRSA GNTLELVGKP IRRDRSDAGS AGRDSNNRPG APTRPGMPAG MRKPVAPGEL 
MQLQKPTGRP GTPPPRRPDG TSVGTRGGSE GATPPVERPA SPTAPKRPGH RPAQAPAAGA 
PRRPGRPDWD DSAKLEALRN KSPQKQRQKV HIIGENDDAL TAETSGYAGE QQAVVLTASL 
ARPAKPKSQK KPASKPVAAL RKRKKETTRQ RQRRRAMELR AAREAKQVRP EMLIVPEANL 
TVQELADMLS IESSEIIKSL FFKGITATVT QSLDLPTIEA VAEEFGVPVL QDDIEEAAKK 
TTEMIEETDL AHLIRRPPVV TVMGHVDHGK TSLLDAIRKA RVAAVEAGGI TQHIGAYQVE 
IDHGGQPRKI TFLDTPGHQA FTAMRARGTK VTDIAVLVVA ADDGVRPQTL EAISHARAAK 
VPIIVAINKT DKEGASPERV KQELSDQNLL SEEWGGDVVM VPVSAIKGEN IDKLLEMILL 
VTEVEDLQAN PDRLAKGTVI EAHLDKAKGP VATLLIQNGT LKTGDVLAAG PVLGKVRAMV 
DDSGARLKQA GPADAVEALG FSEVPTAGDE FEVYPDEKSA RAVVGERASD ARATRLAQQM 
ASRRVSLAAM SGQASDGELK ELNLILKADV QGSVEAILGS LEQLPKDEVQ VRVLLSAPGE 
ITETDVDLAA ASGAVIVGFN TSMASGAKRA ADATGVDVRD YDVIYKLLED IQMAMEGLLE 
PELVEESLGE AEVRAVFTIG KSAVAGCYIT TGKLQRNCRV RVRRAKQVVF EGDLDSLRRN 
KDDVKEVATG FECGIGCDRF ANWEERDIIE AHKLVTKRRT LSSS