| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_03731 |
|---|
| Symbol | |
|---|
| ID | 4776376 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 375245 |
|---|
| End bp | 378061 |
|---|
| Gene Length | 2817 bp |
|---|
| Protein Length | 938 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640085876 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001016390 |
|---|
| Protein GI | 124022083 |
|---|
| COG category | [E] Amino acid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG1233] Phytoene dehydrogenase and related proteins |
|---|
| TIGRFAM ID | [TIGR02733] C-3',4' desaturase CrtD |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.968761 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCACGTGC TTGACCGCGA TATTTTGCTG CCCTCTTATG ATGTCTTAGT AGTTGGCGCT
GGGATTGGCG GACTAACAGC AGCAGCACTT CTTGCTAAGC GTGGTTACAG AGTTTTGGTA
GTAGAGCAGC ATTATCTCCC TGGTGGATGC GCGAGTATCT TTCGCCGTCA AGGGTTTACA
TTTGATGTGG GAGCTTCTCT CTTTTTTGGG TTTGGAGAAA AAGGCTACAA CCCACATCAA
TTTGTCATGA ATGAGCTGGA GGAAGACATT ACTCTTGTGC CGATGGATGA AACCTTCACT
ATCCATCTAG ATCAGAAAAC CAAAGTCTCT ATGTATACAC AACGGGAAAG ATTTTGGGAA
GAAATGTGTT CTTGTTTCCC ACACCAATCA GAACAAATCA AAGCATTACT AAGGGAATTC
GAATCTTTTT ATCATGACTC ATTGGATAGC TATGGTGGTC AGTTTTTTGC GCCAGCGGAA
ACACCACCGC AACATGGCAT CAATTTGATG CTTACGCGCC CGTTCTATTT GGCAAGGTTG
CTCAATTATC TGCTTTCAAC TCAAGAGCAG CTATTTCGCC GCTTTACGCG AGATCCGCAG
ATTCTCAAAC TATTTACGCT TTTAAATCAA AATATGACCA CTTGTGGATT GGATCAGACT
CCTGCCATCG CCGGCCCAAT GATCCACGTG GAATCTTACA CTGGTGGTTG CTATTATGCT
CAAGGCTCAC CACAGATATT GGCGAATAAA CTAGAAAAAG CCATTCATAA ATATGGTGGG
CAAATATTAT ATCGCAATCG CATTGACAAG ATCTTAATTG AGAAAGGCAA GGCGATTGGC
TGTCAACTTG AAAATGGTCT TAAGATTAAA GCTCATACAG TAATCTCAAA CACAACGATC
TGGAATCTCT ATGGTAAGTT GATCGATCCC CAGCATATCT CCCGCAGAAA AAGAAAGTGG
GCAAAGAAAT TTAGGCCAAT TTATAGTGTA TTTGGTGTTT ATCTCGGTGT TAAAGCAGAA
GCTGTCCCTC CTGCGATTAA GCCTACACAA ATACTGCCCT ATGACGACAA AGGTTCTTCA
AGTTATCTGA CAGTCTATGT CACGTCGATG TTGGATCCTG ATGCTTCTCC GCCAGGGACC
CATACACTCT GCATATTTCT ACCGGAATCT ACTCCAGAGA TTACAGTGCC AACAGATGGC
AAAGATAAAT ATCATAGCCG TACATATCGA GATCAAAAGC AGAAAAAAGC ATCAGCAATT
ATTGATTACT TAGAAAAGAA TTATTTCCCA GAACTAAAAA AACATATCTT GGTTCAGGAA
ATAGCTACCC CACAGACTAT TCAGCGCTAT ACCCTTAAAA GTCATGGATC TATTGGTGGA
CCACAGGTGA ATATGAGCCA AAGCTATATG AGTCGGCTGG CTGCTCGCAG TGATTGGCAA
GGTCTTTATT GTGTAGGGGA TTCCACCAGT CAAGGGATCG GCGTAGTTTC TGTGACTGTG
TCCGCAATAA GTGCAGTCAA TGCAATTTTA AAGGATCTTC GTCAACCTCA ATATCTTCCA
TTAAAACATT ATCCTCAAAA TTATGTGCAT TTTGCTAAAG CCTCTCTATC TCAAGAACAA
CACTCTGCGT ATTTGTTCCC AGACAGTCAG ATTATACAAA CTGTGGAATT AGAGCCCCGA
GCTTGTCTCT CTCCGCGCTG CGTTCGTGCT GGTCCAGACA GTACTCATCA AGCCCATATC
GCACGTCTTG TCGAAGCCGG TAATTGGCTT GGTGCTGCCC AGTCATTACG AGCCGTTAAT
CCACTTTCAG AAATAACCTC GTACCTTTCT CAATCAGACG ATTTTTGTGG TCCTTCATGT
TCGCAATTGT TATGTCCTGA CGCTTCTATT CCCATTAAGT CATTAAATCG CTATGTGTGC
GAGAAAGTCC CCAATTACAT ACCAGATGTA GCTCCGGATA ATGGTAAGCG AATTTCTATT
GTTGGGGCCG GGCCTGCTGG TCTAACATGC GCTCACTATT TGGCGCGTTT AGGCTACCAA
ATAGATATCT ACGAGAAGCA AAGCGAATCT GGAGGGATTT TGAAGAGGAT TACTCTTGCA
TCAAGGATTC CTCAGTCAGT CTTGCATCGT GAAATATCAA ACCTATTATT GCCTTCTATT
AGGATTTATT TTGATCAATC TTTAGGTGAA GATATCACAA TTGCTGAGCT TAGACTTCAA
TATGATGCAA TCTTTTTAGC CTGTGGTCTA GGAGAGAAGC AAATTCAGCC TAAAGATATC
GATCAAGATT TCAACTTGAT TCATGGTCTG AAGTTTTTAG ACCAATTTAC TCAAGAGCCA
GCTATTGTTA GAGAAAAGAT ATTGACAATA GTTGGTGCTA CCTACCTTGC TACGGATATC
TCAAAGTTGG CAATTCAAAA TGGTGCAAAG AAGGTTTGTC TTATTGACGA GCTGTCTGAA
CTGCAATCGA AATCTCAGGC TAAGCGATTA ACAGAAATGC AAGAACTTGG AATTGAAATC
CACTCCAGAA TAGATCCAAT AGCTTTCTCT GAACTCTGTA GTTCTTCTCA TCAGGTGATC
ATGGCAGGTT TGGAGCAACA GCGTATTCAG TCTGAATTAA GGGACCATCT AAGTACAAGT
CTTGTGGTAG ACATTGATGA CTGGGTTGAC TTAGAGACGC TTCAGGTTCA TGGTCAGGTC
AATGTATTCG CCGGTGGAGA TATCATTAGA GGCTCCAGTA GTATGCAAGA ATCAATTAGA
GACGGTCGCA AGGCAGCAGT AGAAATCAAT CATGCCTTAA TGAAGAATCA ATCTTGA
|
|---|
| Protein sequence | MHVLDRDILL PSYDVLVVGA GIGGLTAAAL LAKRGYRVLV VEQHYLPGGC ASIFRRQGFT
FDVGASLFFG FGEKGYNPHQ FVMNELEEDI TLVPMDETFT IHLDQKTKVS MYTQRERFWE
EMCSCFPHQS EQIKALLREF ESFYHDSLDS YGGQFFAPAE TPPQHGINLM LTRPFYLARL
LNYLLSTQEQ LFRRFTRDPQ ILKLFTLLNQ NMTTCGLDQT PAIAGPMIHV ESYTGGCYYA
QGSPQILANK LEKAIHKYGG QILYRNRIDK ILIEKGKAIG CQLENGLKIK AHTVISNTTI
WNLYGKLIDP QHISRRKRKW AKKFRPIYSV FGVYLGVKAE AVPPAIKPTQ ILPYDDKGSS
SYLTVYVTSM LDPDASPPGT HTLCIFLPES TPEITVPTDG KDKYHSRTYR DQKQKKASAI
IDYLEKNYFP ELKKHILVQE IATPQTIQRY TLKSHGSIGG PQVNMSQSYM SRLAARSDWQ
GLYCVGDSTS QGIGVVSVTV SAISAVNAIL KDLRQPQYLP LKHYPQNYVH FAKASLSQEQ
HSAYLFPDSQ IIQTVELEPR ACLSPRCVRA GPDSTHQAHI ARLVEAGNWL GAAQSLRAVN
PLSEITSYLS QSDDFCGPSC SQLLCPDASI PIKSLNRYVC EKVPNYIPDV APDNGKRISI
VGAGPAGLTC AHYLARLGYQ IDIYEKQSES GGILKRITLA SRIPQSVLHR EISNLLLPSI
RIYFDQSLGE DITIAELRLQ YDAIFLACGL GEKQIQPKDI DQDFNLIHGL KFLDQFTQEP
AIVREKILTI VGATYLATDI SKLAIQNGAK KVCLIDELSE LQSKSQAKRL TEMQELGIEI
HSRIDPIAFS ELCSSSHQVI MAGLEQQRIQ SELRDHLSTS LVVDIDDWVD LETLQVHGQV
NVFAGGDIIR GSSSMQESIR DGRKAAVEIN HALMKNQS
|
|---|
| |