Gene P9303_03091 details

Gene Information

• Locus tag: P9303_03091
• Symbol: def
• ID: 4777581
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: +
• Start bp: 323349
• End bp: 323954
• Gene Length: 606 bp
• Protein Length: 201 aa
• Translation table: 11
• GC content: 54%
• IMG OID: 640085811
• Product: peptide deformylase
• Protein accession: YP_001016327
• Protein GI: 124022020
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0242] N-formylmethionyl-tRNA deformylase
• TIGRFAM ID: [TIGR00079] peptide deformylase

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 15
• Fosmid unclonability p-value: 1
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

TTGGCTCGAA GCTTCGCTCA GCTGGCACGT ACGGCCGAAA AAACCAAGGG CTCTGTTGCA 
GTCCCGAAGG AGCCGCTTGA TCATCCGCCT CTGCAAATTC ACACGTTGGG CAATGGGGTT 
TTGCGGCAAT CCACCCGTCG GATTGGCAAG GTTGATGAAT CTGTGAGGGA CTTGGTGAGG 
GACATGCTTC GCAGCATGTA CGCAGCTAAG GGGATTGGTT TGGCTGCCCC TCAGGTGGGA 
ATTCATAAAC AGCTCTTGGT CCTTGATCTT GATCTGGAAA CCCCTACAAC CCCGCCAGTG 
GTGTTGATCA ATCCCGAGAT CATTAGCTCC AGTGCAACTG TTGAAACCTA TGAGGAAGGC 
TGCCTGAGCA TCCCAGGCGT TTATCTCAAT GTGGTGCGGC CTAGTGAGAT CGTGCTCAGT 
TTTCGCGATG AGATGGGACG ACCACGCAAA ATGAAGGCCG ACGGCCTGAT GGCTCGCTGC 
ATCCAGCACG AGATGGATCA CCTTGAAGGT GTCCTTTTTG TTGACAGGGT CACCGATGAG 
AATGAGCTCA GCCTTGAGTT AAAGGAGCAT GGCTTCAAGC GAGCTGATGT TCGTCCGCTG 
GTTTGA 

 

Protein sequence

MARSFAQLAR TAEKTKGSVA VPKEPLDHPP LQIHTLGNGV LRQSTRRIGK VDESVRDLVR 
DMLRSMYAAK GIGLAAPQVG IHKQLLVLDL DLETPTTPPV VLINPEIISS SATVETYEEG 
CLSIPGVYLN VVRPSEIVLS FRDEMGRPRK MKADGLMARC IQHEMDHLEG VLFVDRVTDE 
NELSLELKEH GFKRADVRPL V