Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_01691 |
Symbol | sdhA |
ID | 4776841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 188621 |
End bp | 190537 |
Gene Length | 1917 bp |
Protein Length | 638 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640085668 |
Product | succinate dehydrogenase flavoprotein subunit |
Protein accession | YP_001016189 |
Protein GI | 124021882 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01811] succinate dehydrogenase or fumarate reductase, flavoprotein subunit, Bacillus subtilis subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.555604 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATAGTT TGCCTGATCC TCGCCTCCCA TCAGGCACGA TCGCCGATGC ATGGAACCGC ACGCAAGGAT CGCTGCCATT AATCAGCTCA TCGCGAAAAC GGGAGCTTCA GTTGTTGGTG GTAGGCACGG GGTTGGCTGG GGCTTCGGCG GCGGCAACCT TGGCCGAGCA GGGCTACCAG GTGCGTGTGA TCAGCTTTCA CGACAGTCCT CGACGGGCAC ACTCAGTGGC CGCCCAGGGA GGCATTAATG CCGCTCGTCC TCGTTCTTTG GATGGTGACA GCGTTAGCCG CCTCTTTGTC GATACCCTTC GCGGCGGTGA CTTCCGTGCG CGTGAGGCCG GCTGCCAGCG TTTGGCTGAG ATCAGTAGCG CGATTATCGA TCAGTGCGTT GCTCAGGGGG TTCCCTTTGC GCGTGAGTAC GACGGAACAC TTTCGACCAG AAGAATGGGA GGGGCTTCGG TCAGTCGCAC CTTTTATGCT CGCGGTCAGA CTGGCCAGCA ATTGCTCTGC GGCGCTTATC AGGCGTTGAT GCGTCAGGTG GCGCTTGGTC AGGTGGAGTT GCTTTGTCGT CGCGACGTTT TAGAGCTCAT CAAGGTGGAT GGCGTGGCCC GAGGGGTGGT GTGCCGTGAC CTGCTCAGTG GTGAATTGGA GGTGCATACC GCTCAGGCTG TTTTGCTAGC GACTGGTGGC TATAGCAACG TCTACTTTCT TTCGACAAAT GCACTGAAAT CGAATGCAAG TGCCATTTGG CGGGCTCATC GTCAGGGAGC TTTATTCGCG AACCCTTGCT TCACCCAGAT CCACCCAACC TGCATTCCAA GTGGTGATCC CTATCAAAGC AAGCGAACTT TGATGAGCGA GAGCTTGCGT AATGACGGTC GTGTTTGGCT GCCATCAGAT TCTGGAGATC AGCGTTCAGC TGTTGAGATT CCTGAGGCCC AGCGCGATTA CTTCCTTGAG CGTCAGTATC CGGCCTACGG CAACATGGTG CCCAGAGATG TGGCTTCACG CCGTGCCAGG GAGCTCTGCA ACTCTGGTTA TGGTGTGGGT CCTGGTGGCC AAGCATTTTA TCTCGACCTG AGCGATGCGA TCTCGAGTCA GGGGCGAGAG GTGATTGTGG AGCGGTACGG CAACCTTTTA GAGATGTATG AGCGAATTAC AGGTGAGGAT CCGTTGATGA CACCAATGTG CATCTCTCCA GCCCCCCACT ACACGATGGG TGGCCTCTGG GTTGACTACT ACCTGATGAG TTCGATCCCG GGATTGTTTG TGCTTGGTGA GGCCAACTTC TCTGAGCATG GTGCGAATCG TCTCGGCGCT AGTGCTCTGA TGCAAGGTTT GGCTGATGGC TACTTCATTG CGCCGGCTAC CGTCACTGCT TGGTTGGCAG GCCATACCAC CACTCCTGTT GCTAATGATC ATTGGGCTTG CCGCGAAGCC CTGGCGAGAG CTCGTGCTCG CATTGAGCTT TTGCTACAGG GGGCGGGTCA ACGGTCGGTT GATTCTTTTC ACCGTGAGCT GGGGGCCGTG ATCCTTGATC GCTGCGGCAT CAGCCGTGAT GCCGAAGGGT TGCGTGTTGG ATTGGCAGAT GTGGCATTGC TGGAGCAGCG TTTTCATGCT GAGGTAAGCA TCCCTTCTCA AGCTCAGGGA CCTAATCCTG AGCTTGAGAA GGGGTTGAGG GTTGCTGATT TCTTTGGGCT GGCAAAGTTG ATGTTGCGCG ATGCCTTGGC TAGGGAGGAG TCTTGTGGAG CCCACTTCCG TGAAGAGCAT CAGACAGAAG AAGGCGAAGC TCGGCGTGAT GATGAGAACT TTGCCCACAT TGCTGCTTGG GAAGATCGTG AGCAGGCCGA GCCTGTTCGC CATGTTGAGC CGCTCAACTT CACGAGCTTG AAGCCCAGTC AACGTAGTTA TCGATGA
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Protein sequence | MNSLPDPRLP SGTIADAWNR TQGSLPLISS SRKRELQLLV VGTGLAGASA AATLAEQGYQ VRVISFHDSP RRAHSVAAQG GINAARPRSL DGDSVSRLFV DTLRGGDFRA REAGCQRLAE ISSAIIDQCV AQGVPFAREY DGTLSTRRMG GASVSRTFYA RGQTGQQLLC GAYQALMRQV ALGQVELLCR RDVLELIKVD GVARGVVCRD LLSGELEVHT AQAVLLATGG YSNVYFLSTN ALKSNASAIW RAHRQGALFA NPCFTQIHPT CIPSGDPYQS KRTLMSESLR NDGRVWLPSD SGDQRSAVEI PEAQRDYFLE RQYPAYGNMV PRDVASRRAR ELCNSGYGVG PGGQAFYLDL SDAISSQGRE VIVERYGNLL EMYERITGED PLMTPMCISP APHYTMGGLW VDYYLMSSIP GLFVLGEANF SEHGANRLGA SALMQGLADG YFIAPATVTA WLAGHTTTPV ANDHWACREA LARARARIEL LLQGAGQRSV DSFHRELGAV ILDRCGISRD AEGLRVGLAD VALLEQRFHA EVSIPSQAQG PNPELEKGLR VADFFGLAKL MLRDALAREE SCGAHFREEH QTEEGEARRD DENFAHIAAW EDREQAEPVR HVEPLNFTSL KPSQRSYR
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