| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_01661 |
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| Symbol | |
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| ID | 4776829 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | - |
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| Start bp | 183435 |
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| End bp | 186695 |
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| Gene Length | 3261 bp |
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| Protein Length | 1086 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 640085665 |
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| Product | RND family multidrug efflux transporter |
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| Protein accession | YP_001016186 |
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| Protein GI | 124021879 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0841] Cation/multidrug efflux pump |
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| TIGRFAM ID | [TIGR00915] The (Largely Gram-negative Bacterial) Hydrophobe/Amphiphile Efflux-1 (HAE1) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTTCT CCGACAATTT CATCAAAAGA CCAGTTCTGA CGACAGTCTG CAGCATCCTC
ATCGTGCTGG TAGGGATTAT CGCAATCCCT TCATTACCAA TTGCCAACCT GCCAAATATA
GCCAGTCCAC TGATCCAAGT CACAGCAAAC TATGGCGGCG GAAATTCGCT AGTCACCGAA
CAAGCTGTCA CCAATCCGTT AGAGCAACAG ATCAACGGTG TTCCTGGCGT TAACTACATC
TCGTCCACCA GTGACATGGA GGGGCAAAGC ACAATCAATG TCTACTTCGA TGAGTCAACT
GATATCAATA TCGACCAAGT CAATGTGCAA AACCGTGTTT CCCTGGCCAT GCCCCAGCTA
CCGGAGCAAG TTCAGGCGAC GGGTGTTTCC GTTGAACAAA GCAATCCATC CATCCTGCTG
GCCTACCAAG TTGGTTCAAC GCAGGGTCAA TTTGACGCTA ATTACCTCAA TGGCCTTATT
TACGAGCAGC TCTATTACCC CCTTGGCAGA GTCCCAGGGG TTGCCAATGT TGCCGTACTG
GGCGGAGCCA ATCCAGCCTA TTGGCTATTT ATCAATCCCG ACAAACTGGC AGCCAACAAA
CTAACTGCCG AAGACATCAT CAATGCTATA AAAAGCCAGA ACAGCGTAGC GATTGGAGGC
CTTGTAGGCG GCCCTCCTGC AACAGGAGAC CAAGCCTATA CATACCCAAT CCTGGTTGAA
AATAATGGCA ATCTTGTCTC CATCGAAGAC TTCAACAACC TCATCGTTAG TCGCACTACA
AGTGGCAATC TTTTGCTGCT AAAAGATATT GGCGAAGTGA TTTATGGCTC TAATACTTTT
ACAGCCGATG CAATCGACGT AAATGGGCAC CCAGCCATGA CACTGGCTGT CTACCAGACA
CCTGATAGCA ACGCATTAGA CGTTTCCAAT GACGTCGTGA AAGTCATCGA TCAGTTTGCT
GCCGCAGCTC CACCAGGGGT CAACGTGTCG CAGATCTACA ACATTGGCCA ATTTATTGAA
TCCTCTGTCG AAGGAGTCGT TGATGCCCTT GGGCTTGCCA TTGTCCTTGT GCTGCTCATT
CTCTTTCTTT TCCTGCAGAA CTGGCGAGCA ACAGTCATTC CGAGCTTGGC TATCCCAATC
TCTCTAATTG GCACCTTTGC CTTCCTTAAA GTTTTCGATT TCTCCATTAA TCAACTCACC
CTGCTTGGCC TAGTCCTCGC TACCGGATTG GTGGTCGATG ATGCAATTGT GGTGATCGAA
GCTGTATCAA AAAATATCGA ATCGGGGATG CGTCCTCGCC AGGCAGCACT GGCATGCATG
GGAGAACTAT TTGGAGCCTT AGTGGCCACG GCTTTGGCCC TGATGGCCGT CTTCGTACCA
GTGGCCTTCT ACCCAGGTGG AATTGGCATC ATCTACAAGC AATTCGCCCT AACCATTGCC
TTCTCAATTG CAATCTCAGC ATTTAACGCC CTAACTTTCT CCCCAATGTT GTCAGGCTTG
ATTCTACGTA GCGACAAGCC TCGAGAACCC AAAGGCTGGG GCTGGATCCT CGCAGGAGTG
TTAGTGGGAT TGGCGTTTGG TCGCTTCACA GCAACTGCTT TCGGCAGCTG GACCTACCTA
CTTGGTGTGG TGTTGGGTGG CATAGCTAGC AGCAACCTCC CTTTAATTTT TCGTCGTTTC
AACAGCTTTT TCGATGATTT ACAAAAGCGT TATGCGCAAC TGATCAAATC GTTAATCAGC
AAACGCCGCT TAATCCTGGC CAGTCTCGCT GGTGGCATCC TGCTGACTGC CTTCGCCTTC
ACTGCCATTC CCTCTGCCTT CATCCCTGAA GAAGACCAAG GGTATGGATT GGGTTTTTAC
CAGCTTCAAA ATGGCGCCTC ACTCAGCCAA ACCCAACAAA CAGGACAGCA AATTGCCGAG
CTGCTCAAAA CCGAAAAGAA CATCAATGCA GCGTCAATTG TGAGTGGCTT CGGTTTCAAT
GGCTCTAGTC CCGATCAGGG TGCATTCTTT TTTGGCCTCA AGCCTCTCAA GGAACGCAAA
GGCAACAGCA ACAGTGCAGC AGCCATCGTC GATCGGCTTA ACGCCAAGTT AGAGAAGCTC
AGTAGTGCCA TGGCGGTTTC TGCCCAACCT CCTGCTGTCC CGGGCTTCTC ATCCCAGGGA
GGTTTTTACT TCCAGTTCAA TGATCTCAGC AACGGGTCCT ACAGCTTCAA CCAACTGGAT
GGGCTTGCCA ATGATCTGAT CAAAGCCGGT AAAGCGAGCA GCGAATTCTC CAGCCTTTAC
ACCCAGTTCA TTCCCAGCGC TCCGGCCTTC GGACTCCAAG TCGACCGAGC TGTGATGGGA
GCCTTAAACG TTGACTATCA GGAGGCAATG AACACCATCG CCACCCTGGC TGGCAGCAAC
TATTCAGGCC TCACATACGA AAACGGTCAA GTCCGCAACA TCTATGTGCA ATCATCAGCC
GAACAACGCA ACGACATTAA CGACATCCTG AGTTATTACG TGCGCAGTCG TGAGGGCGAG
CTTGTACAAG TCTCACAGTT CGCCTCCGCA GACCTGAGCA GTGCGCCCCC AGTCATCAGC
CATTACAACC TCTACCGCAC AGTGCTCATT CAGGGTGCGG AGGCTGTCGG CAAAAGTTCA
GGCCAAGCCT TACAGGCCAT TCAAAACCTC TTCCAAAAAC AAGACTTCTC CAACATCGGC
TACGCCTTCA CCGGATTGGC TGCACTGCAG TTATCTGCAG GCAGCGCAAG CATCATGGTC
TTCGGACTCG GACTGCTCAT CGTCTATCTG GTGCTATCTG CCCAATACGA GAGCTATGTC
ACACCAGTCA TCATTCTGAT GACTGTGCCA TTAGCGATGC TTGGAGCGTT GGCGTTTCTA
GCGATCCGCT CGATCGACCT CAACATCTAT GCCCAGGTTG GCCTGGTGAC CCTCATCGGC
CTGGCGGCTA AAAACGGCAT CCTGATTGTG GAAGTCGCCG AACAAAATCT GAAAAGCGGC
ATGACCCCGA GTGATGCTGT AATTGCCTCG GCCGAATCCC GCTTACGGCC AATCCTGATG
ACTGCTATTG CAGCCTTAGC CGGCTTCCTC CCTCTAGTGG TGGCCAATGG AGCTGGTGCC
CATAGCCAAC AATCACTGGG CACTGTGATT TTTGGAGGCC TAGTGGTGGC CACAGTGCTG
TCTCTAGGAG TGGTACCGCC CTTTTATGTT GTGGTAAAGC ATCTAGAGGA GCGCTGGTTC
AGCAGCGAAC CACAGATTTG A
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| Protein sequence | MAFSDNFIKR PVLTTVCSIL IVLVGIIAIP SLPIANLPNI ASPLIQVTAN YGGGNSLVTE
QAVTNPLEQQ INGVPGVNYI SSTSDMEGQS TINVYFDEST DINIDQVNVQ NRVSLAMPQL
PEQVQATGVS VEQSNPSILL AYQVGSTQGQ FDANYLNGLI YEQLYYPLGR VPGVANVAVL
GGANPAYWLF INPDKLAANK LTAEDIINAI KSQNSVAIGG LVGGPPATGD QAYTYPILVE
NNGNLVSIED FNNLIVSRTT SGNLLLLKDI GEVIYGSNTF TADAIDVNGH PAMTLAVYQT
PDSNALDVSN DVVKVIDQFA AAAPPGVNVS QIYNIGQFIE SSVEGVVDAL GLAIVLVLLI
LFLFLQNWRA TVIPSLAIPI SLIGTFAFLK VFDFSINQLT LLGLVLATGL VVDDAIVVIE
AVSKNIESGM RPRQAALACM GELFGALVAT ALALMAVFVP VAFYPGGIGI IYKQFALTIA
FSIAISAFNA LTFSPMLSGL ILRSDKPREP KGWGWILAGV LVGLAFGRFT ATAFGSWTYL
LGVVLGGIAS SNLPLIFRRF NSFFDDLQKR YAQLIKSLIS KRRLILASLA GGILLTAFAF
TAIPSAFIPE EDQGYGLGFY QLQNGASLSQ TQQTGQQIAE LLKTEKNINA ASIVSGFGFN
GSSPDQGAFF FGLKPLKERK GNSNSAAAIV DRLNAKLEKL SSAMAVSAQP PAVPGFSSQG
GFYFQFNDLS NGSYSFNQLD GLANDLIKAG KASSEFSSLY TQFIPSAPAF GLQVDRAVMG
ALNVDYQEAM NTIATLAGSN YSGLTYENGQ VRNIYVQSSA EQRNDINDIL SYYVRSREGE
LVQVSQFASA DLSSAPPVIS HYNLYRTVLI QGAEAVGKSS GQALQAIQNL FQKQDFSNIG
YAFTGLAALQ LSAGSASIMV FGLGLLIVYL VLSAQYESYV TPVIILMTVP LAMLGALAFL
AIRSIDLNIY AQVGLVTLIG LAAKNGILIV EVAEQNLKSG MTPSDAVIAS AESRLRPILM
TAIAALAGFL PLVVANGAGA HSQQSLGTVI FGGLVVATVL SLGVVPPFYV VVKHLEERWF
SSEPQI
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