| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_01641 |
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| Symbol | |
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| ID | 4776823 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 181490 |
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| End bp | 182542 |
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| Gene Length | 1053 bp |
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| Protein Length | 350 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640085663 |
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| Product | Type II alternative RNA polymerase sigma factor, sigma-70 family protein |
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| Protein accession | YP_001016184 |
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| Protein GI | 124021877 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACTGCT CGGGAGTAAG CTTTACAAAA CGCAATAGAG TTGTCGTGGT CGACTCCGCA
GTCTCCAAAG CCCTTGTTAA ATCAGCGGTT GTGCCTGCTC GTCAGTTGCC CGCAGATGTC
GACCTGGTGC GTTCATACCT GCGCGATATC GGTCGAGTGC CGCTACTGAG CCATGAGCAG
GAGATCACGC TGGGTCGTCA GGTGCAGGAG TTGATGTCTT TAGAGCAGCT TGAGTCTGAA
CTGGAAGGTA AAACAGGCGC GCCAGCGAGT CGTAAAGAAC TAGCGAAGGC AGCTGGATTG
AGTGAGTTGC AGCTCAAGAA GAAGTTGCAG ATCGGACGAC GTGCGAAGGA GCGGATGGTG
TCGGCGAACC TGCGCTTAGT GGTGAGTGTT GCCAAGAAGT ACACCAAAAG GAATATGGAG
CTTCTTGATT TGATCCAAGA GGGAACGATC GGCTTGGTGA GGGGAGTGGA GAAGTTCGAC
CCAACCCGTG GCTACAAGTT TTCGACCTAT GCGTATTGGT GGATTCGCCA GGGGATCACG
CGTGCGATTG CGGAGAAGAG CCGGACGATC CGTCTGCCGA TCCACATCAC AGAGATGCTG
AACAAGCTCA AGAAAGGCCA GCGAGAGTTA AGTCAGGAGA TGGGGCGCAC GCCAACAGTG
AGCGAACTTG CAGAGTTTGT GGAGTTGCCC GAGGAGGAGG TGAAGGATCT GATGTGCCGT
GCACGTCAGC CGATGAGTTT GGAGATGAAG GTGGGAGATG GGGATGAAAC GGAGTTGCTT
GAGTTGCTTG CCGGGGAAGA GGAGTTACCG AGTGAGAAGG TGGAAGTGGA TTGCATGAAA
GGCGATTTAC GTACCTTGCT GGAAAAGTTG CCCGAGTTGC AGGGTCGTGT GCTGCGGATG
CGTTATGGAA TCGACGGAGG CGAGCCGATG AACCTCACCG GGATTGGTCG CATCCTCGAC
ATCAGTCGTG ACCGTGTTCG CAATCTGGAG CGCCATGGAC TCAATGGTCT GCGCCAGTTG
AGTGAAACGG TTGAGGCCTA TGCGGCTTGC TGA
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| Protein sequence | MDCSGVSFTK RNRVVVVDSA VSKALVKSAV VPARQLPADV DLVRSYLRDI GRVPLLSHEQ
EITLGRQVQE LMSLEQLESE LEGKTGAPAS RKELAKAAGL SELQLKKKLQ IGRRAKERMV
SANLRLVVSV AKKYTKRNME LLDLIQEGTI GLVRGVEKFD PTRGYKFSTY AYWWIRQGIT
RAIAEKSRTI RLPIHITEML NKLKKGQREL SQEMGRTPTV SELAEFVELP EEEVKDLMCR
ARQPMSLEMK VGDGDETELL ELLAGEEELP SEKVEVDCMK GDLRTLLEKL PELQGRVLRM
RYGIDGGEPM NLTGIGRILD ISRDRVRNLE RHGLNGLRQL SETVEAYAAC
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