| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_01511 |
|---|
| Symbol | secA |
|---|
| ID | 4776623 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. MIT 9303 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008820 |
|---|
| Strand | + |
|---|
| Start bp | 167715 |
|---|
| End bp | 170570 |
|---|
| Gene Length | 2856 bp |
|---|
| Protein Length | 951 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 53% |
|---|
| IMG OID | 640085650 |
|---|
| Product | preprotein translocase subunit SecA |
|---|
| Protein accession | YP_001016171 |
|---|
| Protein GI | 124021864 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG0653] Preprotein translocase subunit SecA (ATPase, RNA helicase) |
|---|
| TIGRFAM ID | [TIGR00963] preprotein translocase, SecA subunit |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTCAAGC TCCTGCTGGG TGATCCCAAT GCCCGCAAGC TGAAGCGTTA CCAGCCGATC
GTCACTGACA TCAATATCCT CGAAGAGGAC ATCGCCTTGC TCAGCGATGA CCAGCTGCGC
TCTAAAACGG CCGATTTTCG CCAGCAGTTT GAGAATGTCG TCAGTTTTCC AAAGCAGCGA
GTTTTACTTG ATGAGCTGCT CCCAGAAGCC TTTGCTGTTG TGCGTGAGGC TGCTAAACGG
GTGCTCGGCA TGCGTCATTT CGATGTGCAG CTGATTGGCG GCATGGTGCT GCATGAGGGT
CAGATTGGTG AGATGAAGAC CGGTGAAGGG AAGACTCTTG TAGCCACTCT GCCTAGCTAC
CTCAATGCCC TCACTGGCCG TGGTGTGCAT GTGGTTACGG TCAATGATTA CCTGGCACGG
CGCGATGCTG AATGGATGGG CCAGGTGCAT CGTTTTCTCG GTCTCAGTGT TGGTTTGATC
CAGCAGGACA TGAGCCCTGC TGAGCGGCGG CGCAATTACG CCTGCGATAT CACCTATGCC
ACCAATTCAG AGTTGGGTTT TGACTACCTG CGTGACAACA TGGCCACCGA TCTGAGTGAG
GTGGTTCAGC GGGAGTTTCA GTACTGCGTC ATCGATGAAG TGGATTCGAT CCTGATCGAT
GAGGCGCGTA CTCCCTTGAT CATTTCCGGA CAGGTGGAGC GTCCCCAGGA GAAGTATCAG
CAGGCTGCAG ATGTGGCTGC TGCTCTGGAG CGGGCTGCCG AACAGGGTAA GGATGGCATT
GATCCTGAGG GTGACTACGA GGTTGATGAG AAGCAACGCA GTTGCACACT CACAGATGAA
GGCTTTGCCA AGGCTGAGCA GAACCTCAAA GTGAGGGATC TGTTTGACCC CGCTGATCCC
TGGGCCCATT ACATCACCAA TGCATTGAAG GCCAAGGAGT TGTTTGTTCG GGATGTGAAT
TACATCGTGC GCGATGGTGA AGCTGTGATT GTTGATGAGT TCACAGGTCG TGTGATGCCA
GGCCGGCGCT GGAGCGACGG ACAGCATCAG GCGATTGAGG CCAAGGAACA GCTAGCGATT
CAGCCTGAAA CTCAGACTCT GGCTTCGATT ACTTATCAAA ATTTCTTTCT GCTCTATCCC
CGCTTGGCTG GCATGACCGG CACCGCTAAA ACCGAAGAGG TGGAGTTTGA GAAGACCTAC
AAACTTGAGA CTTCAGTTAT CCCTACCAAC CAGCCTCGGG CTCGTGCGGA TTGGGTGGAT
CAGGTTTATA AGACTGAATC AGCCAAGTGG CGCGCCGTGG CCAACGAAAC GGCCGAAATT
CATAAGCAGG GAAGGCCTGT TCTGGTTGGC ACGACCAGTG TTGAGAAAAG CGAACTGTTG
AGTTCTCTGC TCTCAGAACA AGAGATTCCT CACAATCTTT TGAATGCCAA GCCGGAGAAT
GTGGAACGTG AGGCGGAGAT CGTGGCCCAG GCTGGCCGTG CAGGGGCTGT GACGATTGCC
ACAAACATGG CTGGCCGTGG GACAGACATC ATCCTTGGCG GAAATAGCGA TTACATGGCA
CGCCTCAAGT TGCGTGAGGT TTTGCTGCCA AGATTGGTGC GGCCTGAGGA GGGTCATCGT
CCACCAGTGC CATTACAGAG GGCTGCCGAG ACAGGTGGTG GGTTCGCTGC CAAGGCCGCT
GCTTCGAATG GATCTCATGG CCATGTCTTA AGCGAGGCCC GTGCAATCGG GAGTCTTTAT
CCTTGCTCGC TCACTGATGA CACTGATCAG TTCCTTGCGG AGTTAGCTCG GGAGCTTGTG
AAGGTTTGGG GAGATAGGGC ACTGAGCGTG ATCGAATTAG AGGATCGCAT CTCCACTGCT
GCTGAAAAAG CACCTACCGA TGATGCGCAG ATTGCTGCCT TAAGAGAGTC GATCGCAAGA
GTAAAGACTG AATACGACGT GGTAGTGACC CAGGAGGAGG TTCGAGTGAG GGAAGCAGGA
GGTCTTCATG TGATTGGTAC AGAACGTCAT GAATCTCGCA GGGTTGACAA TCAACTTCGT
GGTCGGGCCG GCCGCCAGGG GGATTTAGGG AGTACCCGTT TTTTCCTTTC TTTGGAAGAC
AACCTATTGC GCATCTTTGG AGGCGAACGG GTGGCTTCGT TGATGAATGC TTTCCGCGTG
GAGGAGGACA TGCCCATTGA GTCGGGCATG CTTACCCGTT CTTTAGAGGG GGCTCAGAAA
AAGGTAGAAA CCTATTACTA CGACATTCGT AAGCAGGTTT TTGAGTACGA CGAGGTAATG
AACAATCAAC GTCGTGCCGT TTATGCCGAA CGTCGCCGTG TGCTTGAGGG TCGCGGACTC
AAGAAGCAGG TGATTGGTTA TGGAGAGCGA ACAATGGACG ACGTTGTTGA GGCATATGTG
AATCCTGATT TGCCCCCTGA AGAATGGGAT TTAGACCAAC TGGTTAGCAA GGTTCAGGAA
TTTGTTTACC TGCTTGAGGA TCTCAAGCCT GAGCAGTTGC AGGGGCTAAG TATGGAGGAA
CTTAAGTCTT TTCTTCAGGA GCAACTGCGC AATGCTTATG ACATTAAGGA GGGTCAGATT
GAGCAGCAGC GACCAGGGTT GATGCGGGAG GCAGAACGCT TCTTCATCCT TCAGCAGATC
GATACACTTT GGCGGGAACA TTTGCAGGCG ATGGACGCTC TGCGTGAATC TGTAGGGTTG
CGAGGGTATG GGCAAAAAGA TCCGCTTATT GAATACAAGA ATGAGGGCTA CGATATGTTT
CTCGAGATGA TGGCAAATAT GCGTCGCAAT GTGATTTATT CGATGTTTAT GTTCCAGCCT
GCTCCTGCTC CTGCTCAAGA GGCCGCGAAT GTTTGA
|
|---|
| Protein sequence | MLKLLLGDPN ARKLKRYQPI VTDINILEED IALLSDDQLR SKTADFRQQF ENVVSFPKQR
VLLDELLPEA FAVVREAAKR VLGMRHFDVQ LIGGMVLHEG QIGEMKTGEG KTLVATLPSY
LNALTGRGVH VVTVNDYLAR RDAEWMGQVH RFLGLSVGLI QQDMSPAERR RNYACDITYA
TNSELGFDYL RDNMATDLSE VVQREFQYCV IDEVDSILID EARTPLIISG QVERPQEKYQ
QAADVAAALE RAAEQGKDGI DPEGDYEVDE KQRSCTLTDE GFAKAEQNLK VRDLFDPADP
WAHYITNALK AKELFVRDVN YIVRDGEAVI VDEFTGRVMP GRRWSDGQHQ AIEAKEQLAI
QPETQTLASI TYQNFFLLYP RLAGMTGTAK TEEVEFEKTY KLETSVIPTN QPRARADWVD
QVYKTESAKW RAVANETAEI HKQGRPVLVG TTSVEKSELL SSLLSEQEIP HNLLNAKPEN
VEREAEIVAQ AGRAGAVTIA TNMAGRGTDI ILGGNSDYMA RLKLREVLLP RLVRPEEGHR
PPVPLQRAAE TGGGFAAKAA ASNGSHGHVL SEARAIGSLY PCSLTDDTDQ FLAELARELV
KVWGDRALSV IELEDRISTA AEKAPTDDAQ IAALRESIAR VKTEYDVVVT QEEVRVREAG
GLHVIGTERH ESRRVDNQLR GRAGRQGDLG STRFFLSLED NLLRIFGGER VASLMNAFRV
EEDMPIESGM LTRSLEGAQK KVETYYYDIR KQVFEYDEVM NNQRRAVYAE RRRVLEGRGL
KKQVIGYGER TMDDVVEAYV NPDLPPEEWD LDQLVSKVQE FVYLLEDLKP EQLQGLSMEE
LKSFLQEQLR NAYDIKEGQI EQQRPGLMRE AERFFILQQI DTLWREHLQA MDALRESVGL
RGYGQKDPLI EYKNEGYDMF LEMMANMRRN VIYSMFMFQP APAPAQEAAN V
|
|---|
| |