Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_00941 |
Symbol | rfbC |
ID | 4777212 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | + |
Start bp | 94031 |
End bp | 94636 |
Gene Length | 606 bp |
Protein Length | 201 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 640085593 |
Product | dTDP-4-dehydrorhamnose 3,5-epimerase |
Protein accession | YP_001016114 |
Protein GI | 124021807 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1898] dTDP-4-dehydrorhamnose 3,5-epimerase and related enzymes |
TIGRFAM ID | [TIGR01221] dTDP-4-dehydrorhamnose 3,5-epimerase |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.0683149 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAAGCTG AAGTCCTGAC CTCCGCGGCA GGGATCCATC TAAACGGACC TTTGTTGTTG TCTCCTCAGG TGCATGGCGA TGAAAGAGGA TTTTTCTTTG AGAGTTGGAA TCAGCGTCGT TGGCAGGAGG TTTTGGCAAG TCATAGGCAG GAAGCGCCTG AGTTTGTCCA AGACAATCAC TCGCGTTCGT CTTGTGGCGT GCTGCGTGGA CTGCACTATC AATTGCCCCC GCATCCCCAG GGCAAGCTGG TGCGTTGCGT AGTAGGTGAG ATCTTTGATG TTGCTATTGA TCTGCGCCGT TCTTCAGCAA CCTATGGTCA GTGGGCCGGA GCTCATTTGA GTGCTGAGAA CCATCAGCAG CTTTGGATAC CGGTTGGCTT TGCCCATGGT TTTCTGACTC TCTCAGAGAG TGCTGAGGTG CTTTATAAAG CCACGGATTT CTGGAGTCGC GATTGTGAAC GGGCGATCCG CTGGGATGAT CCACGCCTAG GAATTTCCTG GCCTGTTGTT CACGTGGATG GAGATCAGAT TCCAGCATCT CTTTCTCAGA AGGATGCTGT TGCTTCTTTG ATGGAGGAGT TGTCTGCAGC TGAAACCTTC AAATGA
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Protein sequence | MQAEVLTSAA GIHLNGPLLL SPQVHGDERG FFFESWNQRR WQEVLASHRQ EAPEFVQDNH SRSSCGVLRG LHYQLPPHPQ GKLVRCVVGE IFDVAIDLRR SSATYGQWAG AHLSAENHQQ LWIPVGFAHG FLTLSESAEV LYKATDFWSR DCERAIRWDD PRLGISWPVV HVDGDQIPAS LSQKDAVASL MEELSAAETF K
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