Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | P9303_00861 |
Symbol | |
ID | 4776533 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. MIT 9303 |
Kingdom | Bacteria |
Replicon accession | NC_008820 |
Strand | - |
Start bp | 85035 |
End bp | 87962 |
Gene Length | 2928 bp |
Protein Length | 975 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 640085586 |
Product | ABC transporter, multi drug efflux family protein |
Protein accession | YP_001016108 |
Protein GI | 124021801 |
COG category | [V] Defense mechanisms |
COG ID | [COG2274] ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain |
TIGRFAM ID | [TIGR01842] type I secretion system ABC transporter, PrtD family [TIGR01846] type I secretion system ABC transporter, HlyB family |
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Plasmid Coverage information |
Num covering plasmid clones | n/a |
Plasmid unclonability p-value | n/a |
Plasmid hitchhiking | n/a |
Plasmid clonability | n/a |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.02392 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACTGG CGAATCTGAA TCACCCCCTT GCTCCACTGC AAAACGCTTT ACAGACCAAA GGTGAGCGGC TGAAGTTTCA AATCGGTCAA TCCCTATGCG AAGAGAATTA TCTCCCTGGT CATGTGTTGC TGATCGAAAG CGGCACCGCC CGTCTGCTTG GTAACAGAGA TGGTCGCTTG ACCACACGCA TCAAACTTGA ATCCGGCTCC TTAATCGGAG CAGTCTCTCT ACTAAGAGGT GAATCTTGCG AAGCCGTACG AGCTGCAACA GAGCTTTTGG CTTGGAGCAT CACAGACGCA ACCTTCCAAC AGCTCTACAA CTCTGAAAAA GACATTCGAG ACTGTTGTGA GGCTTACCTC TGGGACGCTG AAGTCGCTGC CCTTCTCCAG GGCATCCGTG CAAGCACACC CAAGAGCCAC CATTCCCTGG AGGCATGGCT GAAGATGCTT GGCCCTCTGG CCACATTGAT GCACGCGAAT AACGATGAAG CAGAAGCAGC CCTAAACAAT GGCAAACGTC TATTCCTTGC CTCGTCGATA CCCAGCTGCC CGATCAACAC TGAGCTGGAC TCAATCGCAG CAATTCGCGA GTTAAGCAAA CCCCAATCTG GTTTCTGCCT AAGGGTGATT GCCCTACCAG CCGACTCACT AGCCACTCTG CTCAGACCAG CAGTCGATAG CAAGAGCAAT GCAGCTCTGC AGAACGACGA AGAGACCCCT GAGACAACAC TGTCACTCGC ACCATCAAGG CCACCCGTCA GCAGCCTCAA TAGCCCCTCA AGCTCCGAAG ACTTCTTCGT TGGCGGTCAA GGCCCTCTCC AAGAAACCCT GGCCTGCTTC CAGATGCTGG CCAAGCTGAT GAAGCTGCCA TTCAGACGCG ACTCGATCGA GAAAATGCTG CGTGACAGTC TGCGGCGCGG CCAAACTCCC ACCCTGCGAA TGTGCGGCCA GATCGCAGCC GGACTTGGCT TACACGTTGC CGGGGCCAAG GTACCAGCCT TGATGGGCAC TCGCTTACAG ACGCCCACCT TGGTGCCATG GAAGCAAAGC TTTGCTCTAG TAACACGCAG CGATCAACTA GGCCTCACCC TGGCCTCACC AAGCGAGGGT TTTATCAAAC TAGATCCGAG TCAGCTGGAG GAAGCCTTTC CTGAAGGCAT CGAACTGCTG CTCCTCGACC GTTCCAACAC CACTCCTGAA CAGGCCTTTG GTCCGAGTTG GTTCTGGCCA GCACTGCAGC GCTATCGGGG TGTCTTAATC CAAGTTTTGA TCGCCGGTTT CGTGGTCCAG CTCTTCACGC TGGCCAACCC GCTGTTGATC CAAGTCATCA TCGATAAGGT CATCAATCAA CGCAGCCTCG ACACACTGCA GATCCTTGGC TTTGCCCTGG TCATCGTGAC TGTGCTTGAA GGTGTGTTGG GCAGTCTCAA AACCTTTCTC TTCGCTGAAA CCACCAACCG CATCGACCAA CGCCTAGGCG CTGAAGTGAT CGACCACCTA CTGCGCCTAC CACTGGGCTA TTTCGACAAG CGCCCAGTTG GCGAATTGGG CTCAAGGGTC AGCGAACTGG AGAAGATCCG CAACTTCCTT ACAGGCCAAG CATTGACCAC CCTGCTTGAT GCTGCCTTCT CTGTGATCTA TGTGGTGGTC ATGGTGATCT ACAGCTGGCT GCTGACCCTG ATTGCCTTGG CTGTATTACC GATTCAGGTC GGACTCACAC TGTTGGGAGC ACCTCTTTTC CGGCGTCAAT TCCGACAAAC TGCCGAGGAA AATGCCAAAA CTCAAAGCCA CCTGGTTGAG GTGCTAACAG GCATCCAAAC AGTGAAGGCT CAGAACGTAG AAATGATCAG CCGTTGGAAG TGGCAAGAGC GTTACGGCCG CTACATCAGC CGAAGCTTTG AAAAAACAAT TAGTGGCACC GCACTAAGCC AAACCAGTCA GGTTCTTCAA AAAATCTCCC AATTACTTGT GCTTTGGGTA GGCGCAAGCA TGGTTTTGGC TGGAGACCTA ACGCTTGGAC AACTGATCGC CTTTCGCATC ATTTCCGGCT ATGTCACCCA ACCGCTACTC AGGCTCTCAA CGATCTGGCA GAGCATCCAA GAACTGAGGG TGAGTTTTGA GCGTCTTGCG GATGTGATCG ACACCCCCCA AGAATCAAAC GACCTCGATA AAGGCAAAGT TCCACTGCCA CCGCTTGAAG GAGATGTGAG CTTTGAAGAT CTCAGCTTCA GCTTCAGCAA ATCGACAGCG CCAGTCTTAA AAGACATCAG CCTAAACATC AAGGCCGGTA CCTTTGTGGG CATCGTGGGT CAGAGCGGAA GCGGCAAGAG CACATTGGTC AAGCTGCTGC CTCGTCTCTA TTCCCCAGAC CAAGGCCGCA TCCTCATTGA CGGCTATGAC ATCGACAAAG TGGAGCTCTA CTCCTTAAGA CGCCAGATTG GGATCGTGCC GCAAGATCCT CTGCTGTTCT CAGGCTCGAT CAGCGAAAAC ATAGCCCTCA CCCAGCCTGA TGCCGATAAC GACGAAATCA TCATGGCTGC AAAGTTGGCA GTCGCTCACG ATTTCATCAT GACGCTACCG AGCGGCTACA GCACGCCGGT GGGTGAACGG GGCTCCTCCT TAAGCGGAGG CCAACGGCAA CGGATCGCCA TCGCTCGCAC GCTGTTAGGC AATCCCAAAC TGCTGGTGAT GGACGAAGCC ACCAGCGCCC TTGATTACGA AACCGAACGC AAAGTTTGCG ACAACCTTGT CAACGCAATG CATGACTGCA CGGTTTTTTT CATCACCCAC AGGCTCTCCA CTGTTCGTCG AGCCGACGTG ATTGTGGTGA TGCATCAAGG GGCAATCGTG GAAATGGGCA CTCACGAAGC CTTGATGGAA AAACGAGGTC GGTACTACGC CCTCTATCGA CAGCAGGAGT CGAGCTGA
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Protein sequence | MTLANLNHPL APLQNALQTK GERLKFQIGQ SLCEENYLPG HVLLIESGTA RLLGNRDGRL TTRIKLESGS LIGAVSLLRG ESCEAVRAAT ELLAWSITDA TFQQLYNSEK DIRDCCEAYL WDAEVAALLQ GIRASTPKSH HSLEAWLKML GPLATLMHAN NDEAEAALNN GKRLFLASSI PSCPINTELD SIAAIRELSK PQSGFCLRVI ALPADSLATL LRPAVDSKSN AALQNDEETP ETTLSLAPSR PPVSSLNSPS SSEDFFVGGQ GPLQETLACF QMLAKLMKLP FRRDSIEKML RDSLRRGQTP TLRMCGQIAA GLGLHVAGAK VPALMGTRLQ TPTLVPWKQS FALVTRSDQL GLTLASPSEG FIKLDPSQLE EAFPEGIELL LLDRSNTTPE QAFGPSWFWP ALQRYRGVLI QVLIAGFVVQ LFTLANPLLI QVIIDKVINQ RSLDTLQILG FALVIVTVLE GVLGSLKTFL FAETTNRIDQ RLGAEVIDHL LRLPLGYFDK RPVGELGSRV SELEKIRNFL TGQALTTLLD AAFSVIYVVV MVIYSWLLTL IALAVLPIQV GLTLLGAPLF RRQFRQTAEE NAKTQSHLVE VLTGIQTVKA QNVEMISRWK WQERYGRYIS RSFEKTISGT ALSQTSQVLQ KISQLLVLWV GASMVLAGDL TLGQLIAFRI ISGYVTQPLL RLSTIWQSIQ ELRVSFERLA DVIDTPQESN DLDKGKVPLP PLEGDVSFED LSFSFSKSTA PVLKDISLNI KAGTFVGIVG QSGSGKSTLV KLLPRLYSPD QGRILIDGYD IDKVELYSLR RQIGIVPQDP LLFSGSISEN IALTQPDADN DEIIMAAKLA VAHDFIMTLP SGYSTPVGER GSSLSGGQRQ RIAIARTLLG NPKLLVMDEA TSALDYETER KVCDNLVNAM HDCTVFFITH RLSTVRRADV IVVMHQGAIV EMGTHEALME KRGRYYALYR QQESS
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