Gene P9303_00831 details

Gene Information

• Locus tag: P9303_00831
• Symbol: holA
• ID: 4777571
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Prochlorococcus marinus str. MIT 9303
• Kingdom: Bacteria
• Replicon accession: NC_008820
• Strand: -
• Start bp: 82164
• End bp: 83174
• Gene Length: 1011 bp
• Protein Length: 336 aa
• Translation table: 11
• GC content: 57%
• IMG OID: 640085583
• Product: DNA polymerase III subunit delta
• Protein accession: YP_001016105
• Protein GI: 124021798
• COG category: [L] Replication, recombination and repair
• COG ID: [COG1466] DNA polymerase III, delta subunit
• TIGRFAM ID: [TIGR01128] DNA polymerase III, delta subunit

Plasmid Coverage information

• Num covering plasmid clones: n/a
• Plasmid unclonability p-value: n/a
• Plasmid hitchhiking: n/a
• Plasmid clonability: n/a

Fosmid Coverage information

• Num covering fosmid clones: 8
• Fosmid unclonability p-value: 0.0698432
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCCGATCC ATCTCTTCTG GGGCGATGAT GCCGCCGCCC GAGACCACGC CATCGAGACT 
CTGATCGGCG ATGTTGTCGA TCAAGCATGG AACAGCATCA ACCTCAGCCG CCTCGATGGA 
GCTGATGCTG GGCAAGCCAG CCAAGCCTTG ACAGAAGCAC GCACACCACC CTTCGGAAGT 
GGCGGACGAC TGGTGCTGTT ACAGCGCAGT CCGTTCTGCA ACGCTTGCCC GAGCGAACTG 
GCCAATCGTT TCGAAGACGT GCTGGATCTG ATTCCAGAAA CCAGCCACCT GGTGCTATGC 
AACCCCAACA AACCAGACGG CCGGCTGCGA ACAACGAAGG CCTTACAAAA GCTTGTGAAG 
TTGAAGCAAG CCAGCGAAAA AAGCTTTCTC CTGCCGGCGA TCTGGGATGG TGCCGGTCAG 
CAGGAGCTGG TGGAACGCAC CGCCCGCGAC TTAGGTCTGC AGCTGGAGCC TGAAGCCACT 
ACAGCGCTGG TGGAAGCCAT CGGCAATGAC AGTACGCGAC TCAACGCAGA GCTGCAAAAA 
CTGGCTCTCC ATGCCGAAAT TCGCCAAGAA AACGCAACTG CTAATCAATC ACCAACTTTG 
ATTAAAGCCG AAAACGTAGC CGCGCTGATT GAGGGAATGG CCACCAATGC ACTACAGGTT 
GGCGATTCAC TCTTGGCAGG CCATGCCGGA GAAGCGATCG CCCGTCTTGA TGCACTACTG 
GATGCCGGTG AGCCAGCTCT TCGCATCGTG GCCACCTTGA CAGGCCAAAT CAGAGGTTGG 
CTTTGGGTGA GTTTGCTGGA GCAGCAAGGG GAACGAGATG TGAACGTGAT TGCCAAAGCA 
GCAGGCATTG GCAACCCCAA GCGGATCTAC GTAATGCGCA AACAACTACA GGGCCGGCCA 
CCGCAGCGAT TCCTCACCCT GCTGAGTCGC TTGCTTGAAG TAGAAGCTGC CCTCAAGCGA 
GGTGCAATCC CTACTGATGC CTTCCGCGAC GGGTTACTCA GCACTCCCTA A 

 

Protein sequence

MPIHLFWGDD AAARDHAIET LIGDVVDQAW NSINLSRLDG ADAGQASQAL TEARTPPFGS 
GGRLVLLQRS PFCNACPSEL ANRFEDVLDL IPETSHLVLC NPNKPDGRLR TTKALQKLVK 
LKQASEKSFL LPAIWDGAGQ QELVERTARD LGLQLEPEAT TALVEAIGND STRLNAELQK 
LALHAEIRQE NATANQSPTL IKAENVAALI EGMATNALQV GDSLLAGHAG EAIARLDALL 
DAGEPALRIV ATLTGQIRGW LWVSLLEQQG ERDVNVIAKA AGIGNPKRIY VMRKQLQGRP 
PQRFLTLLSR LLEVEAALKR GAIPTDAFRD GLLSTP