| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | P9303_00111 |
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| Symbol | rsbU |
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| ID | 4776076 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. MIT 9303 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008820 |
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| Strand | + |
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| Start bp | 14295 |
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| End bp | 15698 |
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| Gene Length | 1404 bp |
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| Protein Length | 467 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 640085510 |
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| Product | protein phosphatase 2C domain-containing protein |
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| Protein accession | YP_001016033 |
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| Protein GI | 124021726 |
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| COG category | [K] Transcription
[T] Signal transduction mechanisms |
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| COG ID | [COG2208] Serine phosphatase RsbU, regulator of sigma subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGAGCAGTA AGCCGCCACG GCGACATCAG ACTCCTTCTT TTCGTAGCGC TTCTCAGCAG
GTGTCAGCCT CTACGTCGTT GCGGCAATTG CTTGATAGCT TGTCGAGGGA GCAGCGCCGA
AATCAGGACT TGTTGGTTTC GTTGGGTTTT GCCCTGCGCA GTTTCACCAA TCTGCATCGT
TTTCTCGAAT TGGTCCCTGT GGTGGCCTCC CGCCTGGTGG GCGTACAAGG AGCATTGCTT
GTGCCTTTTC AGGTTGATGG TCGTTTGTGG AGAGAGCAGC TTCAGGCAGT GCCATTTGAT
CAGAGTCAGG AATTAGTGAG GCAGTTGGCT TCATTTGAAG CAGGTTTTGC CACAGGTTTC
GGCACTGATG AGGCACAGGT TCTTGCTATG GATCAGTTGG TTCAGCGCCA TTTGGCTAGG
GCCGGGATGT TTGCCACCTC ATTAGTTGCT CGCGGGCAGC AGCGTGGCAG GCTTTATGTT
TTTGATCCTC AAGCAGCTCT GATTTGGAGT GATGTTCACC GTCGCCATGT GCAGTTGGTG
GCTGACCTTA CTGGGGTGGC TATTGAGAAC GATCTGATGC TTCAGGAGGC TCGTCTTCAC
GAGCGGGTGG ACCGTCAACT CAGTATCGGG GCAGAGATTC AGGCTCAGCT CTTGCCAGAT
CGTTGTCCTG TGATTGAAGG TGTCGAGCTT GCGGCTCGTT GCCGTCCCGC CTTTCAGGTC
GGCGGCGATT ATTACGATTT CATCCCTACC CGTCCAGAAC TGATCGGTCG ACGCAAGGAA
CGAGGTCGTT GGGGTCTTGT GATGGGAGAT GTGATGGGTA AGGGTGTACC TGCTGGTTTA
TTAATGACCA TGCTCAGGGG CATGTTGCGT GCAGAGGTGT TAAGTGGTCT GCCGCCCAAT
CGGATTCTCC ATGATCTCAA TCAGCTAGCT CAAGAGGACT TGGCTCAGTC CCATAGGTTT
GTGACTCTTT TTTATTCTGA CTACGATCCG CGCACGCGTC GTCTTCGCTA TGCAAATGCT
GCTCATAATC CTCCTCTGAT CTGGCGAGCT GAGCAACGCA GTGTGAGTCG GCTTGATGTG
CCTGGTTTGT TGATTGGACT TCAGCCAGAG GCGGATTACA GCTGTGGTGA AATTTTGCTC
AAGCCTGGTG ACGTGATTAT TTACTACACA GACGGTGTTA CCGAAGCTTC TGGCATCACC
GGAGATCGTT TTGATGAAGC TCGCTTGATT CGCACAATGG AGGGATCTTG TCGAAGTGGT
TTAGGCGCAC AGGGGATTCT TGATCAGTTA TTTGCTCGTT TGGATCGGTT TGTCGGTGTG
GACCATCAAC TGGAAGATGA TGCCTCAATG GTGGTTTTGA AAGTGCCAGA GGAGGTAACG
CTGCCTTCTG TGTCCCTGGC CTGA
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| Protein sequence | MSSKPPRRHQ TPSFRSASQQ VSASTSLRQL LDSLSREQRR NQDLLVSLGF ALRSFTNLHR
FLELVPVVAS RLVGVQGALL VPFQVDGRLW REQLQAVPFD QSQELVRQLA SFEAGFATGF
GTDEAQVLAM DQLVQRHLAR AGMFATSLVA RGQQRGRLYV FDPQAALIWS DVHRRHVQLV
ADLTGVAIEN DLMLQEARLH ERVDRQLSIG AEIQAQLLPD RCPVIEGVEL AARCRPAFQV
GGDYYDFIPT RPELIGRRKE RGRWGLVMGD VMGKGVPAGL LMTMLRGMLR AEVLSGLPPN
RILHDLNQLA QEDLAQSHRF VTLFYSDYDP RTRRLRYANA AHNPPLIWRA EQRSVSRLDV
PGLLIGLQPE ADYSCGEILL KPGDVIIYYT DGVTEASGIT GDRFDEARLI RTMEGSCRSG
LGAQGILDQL FARLDRFVGV DHQLEDDASM VVLKVPEEVT LPSVSLA
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