Gene NATL1_21801 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21801 
SymbolaroG 
ID4780300 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1837917 
End bp1838987 
Gene Length1071 bp 
Protein Length356 aa 
Translation table11 
GC content37% 
IMG OID640085478 
Productphospho-2-dehydro-3-deoxyheptonate aldolase 
Protein accessionYP_001016000 
Protein GI124026885 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0722] 3-deoxy-D-arabino-heptulosonate 7-phosphate (DAHP) synthase 
TIGRFAM ID[TIGR00034] phospho-2-dehydro-3-deoxyheptonate aldolase 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.299148 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCCACCT CATCATATTT TTCAATGGTG GATAGCACCT CCGACCTTCA TGTTGTCGAG 
ACTCGTCCAT TAATGTCACC AGCATTAATT CATAGAGATT TGCCTTTAGA TAAGGCATCC
TCTGGAGTTG TCTCTACTAC TCGAAACAAG ATTCAATCAA TTCTTCATGG TAATGACCCA
AGAATTTTAG TGATTGTTGG ACCGTGTTCG ATTCATGATG TTGATGCTGC TATTGAATAT
GCAAATCGTT TAGCGCCATT GAGGGAGAGA TATAGTCAAA AGCTTGAGAT TGTTATGCGT
GTTTATTTTG AGAAACCACG CACAACTGTT GGTTGGAAAG GACTTATTAA TGATCCTCAT
CTTGATAATT CTTACGATAT TAATACTGGT TTAAGAAAGG CAAGAGGTCT ATTACTTGAT
TTAGCCAAAG CAGGAATGCC GGCTGCAACT GAATTACTGG ATCCCGTTGT TCCTCAATAT
ATTGCTGATT TAATTAGTTG GACTGCTATT GGAGCAAGAA CGACAGAGAG CCAGACTCAT
CGTGAAATGG CGTCTGGATT ATCAATGCCT GTTGGTTATA AGAATGGTAC TGACGGGACA
GCAACGATAG CGATTAATGC AATGCAAGCG GCTTCAAAAC CTCATCATTT TTTAGGAATT
AATCATGATG GTCATGCCTC AATAGTGAGT ACTACAGGTA ATCCAAATGG TCATCTTGTT
TTAAGAGGTG GTAAGAATGG GACTAATTAC CATTTTGATG CAATTAAGTT AATTACAGAT
GAGTTAGAAC AATTTAAGAT GCCTGGAAAA GTTATGGTTG ATTGTAGTCA TGGTAATTCC
AATAAAGATT TTCGTAGACA ATCAGAAGTT TTAAGAGATG TAGCATCACA GATAAAAGGT
GGATCAAAGA ATTTAATGGG CGTAATGATA GAAAGTCATC TTGTTGAGGG TAATCAGAAA
TTAAATTTAG ATGTGTCAAC ACTCACCTAT GGGCAAAGTG TTACGGATGC ATGCATAAAC
TTTTCTACAA CTGAAATTTT ATTAGAGGAA CTAGCTGAAT CGGTTAAATA A
 
Protein sequence
MSTSSYFSMV DSTSDLHVVE TRPLMSPALI HRDLPLDKAS SGVVSTTRNK IQSILHGNDP 
RILVIVGPCS IHDVDAAIEY ANRLAPLRER YSQKLEIVMR VYFEKPRTTV GWKGLINDPH
LDNSYDINTG LRKARGLLLD LAKAGMPAAT ELLDPVVPQY IADLISWTAI GARTTESQTH
REMASGLSMP VGYKNGTDGT ATIAINAMQA ASKPHHFLGI NHDGHASIVS TTGNPNGHLV
LRGGKNGTNY HFDAIKLITD ELEQFKMPGK VMVDCSHGNS NKDFRRQSEV LRDVASQIKG
GSKNLMGVMI ESHLVEGNQK LNLDVSTLTY GQSVTDACIN FSTTEILLEE LAESVK