| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21781 |
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| Symbol | |
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| ID | 4780313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1836223 |
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| End bp | 1837245 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640085476 |
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| Product | type II alternative sigma-70 family RNA polymerase sigma factor |
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| Protein accession | YP_001015998 |
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| Protein GI | 124026883 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02997] RNA polymerase sigma factor, cyanobacterial RpoD-like family |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.185298 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGGATCC CGCTGGAATC TGCCAAGGAA ATTTCTGATG TTTCATTGGG AAAATCTAAT
TCGGCAAGCA CAAGTCAAAA ACTATCTGCA TCAACTGTAA GTAGTCAAAA ATCTCGAAGT
TCTAGAAGAC AAAGTAATCG TTTAGCTACT GATGCGATAG GTTTCTATCT AACAAGTATT
GGCAGAGTCC CACTTCTGAC TCCTGCAGAA GAAATTGAGC TTGCTCATCA TGTTCAACAA
ATGAAAGATT TGTTGAACCT TCCTCTTGAA GAACGCTCTA CCCGTCAGAA GCACAAAATA
AAAATGGGTA AACGGGCAAG AGATCGCATG ATGGCTGCAA ATCTTAGGCT TGTTGTAAGT
GTTGCAAAAA AATATCAAAA CCAAGGTCTC GAATTACTCG ATTTAGTTCA AGAAGGTGCC
ATTGGATTAG AAAGAGCTGT CGATAAATTT GATCCTGCAA TGGGTTATAA ATTCTCAACC
TATGCTTACT GGTGGATAAG ACAAGGGATG ACTCGTGCCA TAGATAACAG TGCTAGAACT
ATTCGACTGC CAATACATAT CAGCGAAAAA CTTTCAAAAA TGCGCCGTAT CTCGCGTGAA
TTATCTCATC GATTTGGTAG GCAACCAAAT CGACTCGAGT TGGCAAACGC GATGGGAATT
GAACCTCAAG ATCTAGAAGA TCTAGTATCT CAAAGCGCGC CATGTGCCTC TCTTGATGCT
CATGCAAGAG GCGAAGAAGA TCGTAGTACT CTAGGAGAAC TAATTCCAGA CCCAAATTCT
GATGAGCCGA TGGAAGGGAT GGATAGAAGT ATTCAAAAAG AACACCTCGG AGGCTGGTTA
TCTCAATTAA ATGAGAGAGA GCAAAAAATC ATGAGACTTC GTTTTGGCCT TGATGGAGAA
GAACCACTTA CTCTTGCTGA AATTGGAAGA CAAATAAATG TTTCTAGAGA GCGTGTAAGA
CAACTTGAGG CTAAAGCAAT TTTAAAATTG AGGGTGATGA CTACTCATCA AAACGCTGCC
TAA
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| Protein sequence | MGIPLESAKE ISDVSLGKSN SASTSQKLSA STVSSQKSRS SRRQSNRLAT DAIGFYLTSI
GRVPLLTPAE EIELAHHVQQ MKDLLNLPLE ERSTRQKHKI KMGKRARDRM MAANLRLVVS
VAKKYQNQGL ELLDLVQEGA IGLERAVDKF DPAMGYKFST YAYWWIRQGM TRAIDNSART
IRLPIHISEK LSKMRRISRE LSHRFGRQPN RLELANAMGI EPQDLEDLVS QSAPCASLDA
HARGEEDRST LGELIPDPNS DEPMEGMDRS IQKEHLGGWL SQLNEREQKI MRLRFGLDGE
EPLTLAEIGR QINVSRERVR QLEAKAILKL RVMTTHQNAA
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