Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_21711 |
Symbol | nirA |
ID | 4780453 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1827268 |
End bp | 1828929 |
Gene Length | 1662 bp |
Protein Length | 553 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640085469 |
Product | ferredoxin-nitrite reductase |
Protein accession | YP_001015991 |
Protein GI | 124026876 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0155] Sulfite reductase, beta subunit (hemoprotein) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.524731 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.247056 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTTCAAT ACTATCTCGA AGGCAAAAAA CTAAATCAAG TTGAAAAAAA TAAAGCTGCT AAGGATGGAC TCGAAATCGG AAAGGATATA GACAAATTTG CTGAAATGGG ATGGGAGCAA ATGGATAAAA CTGATTTAGA ATTAAGATTG AAATGGTATG GGATGTTTTG GAGACCCAAA ACCCCTGGAA AGTTTATGTT AAGGTTAAGA ATACCTAATG GAATAATCAA TGCAGAACAA TTAAAGGTAA TTGCATCAAT TGTTGCGAGA TATGGAGAGA ATGGAAGTTG TGATATAACA ACTAGACAAA ATATACAACT TAGAGGTGTT TTGATTAGTG ATTTGCCTGA GATATTAAAT AGGTTAAAAA AAGTAAACAT ATCAACAACT CAATCTGGAT TTGATAATCC AAGAAATGTT ACTGGAAATC CCATCGCTGG AGTTGATCCA GAAGAGATTA TAGACACAAG AATATATACA TCAAAAATGC AAGACCATTT AACTAATGAT GGTAAAGGAA ACTCAGAATT TTCAAATCTT CCAAGGAAAT GGAACACAGC TATAGCAGGC TCTAAGGATA ATTTTCTTTT ACATAATGAT TTAATTTTTC ATCCAGTTAA AATTAATGGG GTTTTAGGTT TTAGTGTTTG GATTGGAGGC GTACTTTCAT CAGTAATGAA TGAATATGCA GTTCCGTTGA ATGCCTGGGT TGAAGAAGAA AAAATTTATG AATTAACATC AATTATTTTA TCCCTCTGGA GAGATAATGG GGAACGTAAT ATAAGACCTA AAGGTAGGTT TAGATTTTAT TTAGATAAAA TTGGCATTGA AACATTTAGA GATCTTATCG AAAAACAATA TGGAACATTA AAAGAAGATC CAGGCTCAAT ATTTTCAGAT AAACCAAGGT CATTTTTTGG AATTCATTCT CAAAAACAAG AAGGTAAATA TTTTGCAGGA ATTCATGTGC CAGTAGGCCG TCTTTTGGCT GAAGATTTAC AAGATCTAGC AAATATATGT GAGAATTTTG GTGATAAAGA AATAAGACTT ACCGAAGATC AAAATATTAT TATTACTGGT ATAGATACAA ATCTAATTGA AGAATTTAAG GAGCAATCTA TCTTACAAAA GTTTCCATTA GAACCAGAAA CTATTGCAGC AGGTACTGTT TCTTGTACTG GAAATACCTA TTGTGGTTTC GCTCTAACAA ATACAAAGGA TCAAGCTTTA AAAATCTCGC ATGAATTAGA CAAAGAATTA GATTTGAAAG ACGAATTAAA GATTCATTGG ACTGGGTGTC CTAATAGTTG TGGTCAAGCC TATATGGGAG GAATTGGTTT AACGGGCAAA AAAGCTAAAG ACAAAGAAGG AAAAACCGTT GAAGCTTATG ATATAAGCAT TGGTGGATCA CAAGGGCCTA ATTATAAATT AGGAGAATTA ATAAAAAAAT CTGTCCCTCA AGATGAATTA AAAGATGTAC TAAAAGATTT ACTTATTTCA GATTTTGATG CAAAAGAAAA AATATTTTTA AGTAAAAAAT CTGGTTCATT ATCTCGATTT ATGAATTGGT TTAGTCCTCT TGGCAAAGAT AAACCGCTGA TTAATCGAGC TAATGGCAGC CACGACATCT TTTCCAAATT TATGAATCGA ATTAGTAATT AA
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Protein sequence | MVQYYLEGKK LNQVEKNKAA KDGLEIGKDI DKFAEMGWEQ MDKTDLELRL KWYGMFWRPK TPGKFMLRLR IPNGIINAEQ LKVIASIVAR YGENGSCDIT TRQNIQLRGV LISDLPEILN RLKKVNISTT QSGFDNPRNV TGNPIAGVDP EEIIDTRIYT SKMQDHLTND GKGNSEFSNL PRKWNTAIAG SKDNFLLHND LIFHPVKING VLGFSVWIGG VLSSVMNEYA VPLNAWVEEE KIYELTSIIL SLWRDNGERN IRPKGRFRFY LDKIGIETFR DLIEKQYGTL KEDPGSIFSD KPRSFFGIHS QKQEGKYFAG IHVPVGRLLA EDLQDLANIC ENFGDKEIRL TEDQNIIITG IDTNLIEEFK EQSILQKFPL EPETIAAGTV SCTGNTYCGF ALTNTKDQAL KISHELDKEL DLKDELKIHW TGCPNSCGQA YMGGIGLTGK KAKDKEGKTV EAYDISIGGS QGPNYKLGEL IKKSVPQDEL KDVLKDLLIS DFDAKEKIFL SKKSGSLSRF MNWFSPLGKD KPLINRANGS HDIFSKFMNR ISN
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