| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21581 |
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| Symbol | speE |
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| ID | 4780587 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Prochlorococcus marinus str. NATL1A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008819 |
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| Strand | + |
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| Start bp | 1814971 |
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| End bp | 1815837 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640085456 |
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| Product | spermidine synthase |
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| Protein accession | YP_001015978 |
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| Protein GI | 124026863 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | [TIGR00417] spermidine synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.703776 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAATTACA AACTAAAAAC AAGGTCAGGG TGGCTTGACG AGTATCATCA AGGCGTTAGA
TATGGACTAG AGGGAAAATT AATACTAGAA GAGTCTAGCC CTTTTCAAAA AATTACCATA
TATGAAAGTA AAAGATATGG GAAAGCACTA TTACTTGATG ATTGCTGGAT GACTGCAGAA
AAGTCTGAAA AGTGTTATCA CGAATGTCTT ATTCACCCTG CCTTGTGTTG TTCTACACGA
ATAGATAATA TTTTAATTAT TGGAGGAGGT GATGGGGGTA GTGCAAGAGA ATGTTTAAAA
TACAAAGAGG TTAAGTCTAT CGATTTAGTT GAAATTGATC TAAGAGTTAT TGAATTAAGT
CAAAAATATT TACCTACTAT TGGAGGAAAT GCATGGTCTG ATTCACGATT AAATTTACAA
ATCAAAAATG GAATTGATTG GGTAAAGCAT ACAAAAGAGA ATTCATATGA TGTAATTATT
ATTGATGGAG CAGATCCTAT TGGACCGTCC AAAGAATTAT TCAGCAATTC TTTTCTGAAA
GATTGCAAAC GAATACTTAA ACCAGGAGGG GTTTTGGCAA CACAAAGTGA ATCTCCAGAG
TCTTTTCAAG AAATTCACAT AAATATTGTC AAAATTCTTC GTGAAATTTT TGACTACGCT
GATCCAATGT ATGGATCTGT ATCCATATAC CCAAGCGGTT TATGGAGCTG GGCATTTGCA
TCTATGGAGA ATCCAAAATA TATATATCCA AAAAAAAGTC GCGTAAAAGA GATCTCCGAA
AATTGTCAGG TTTGGAGTGA GCGATGGCAA CAAGGTGCTT TTAACACTAT TCCTGCATTT
ATAGAAAGGG AGCTAGCAAA AATATGA
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| Protein sequence | MNYKLKTRSG WLDEYHQGVR YGLEGKLILE ESSPFQKITI YESKRYGKAL LLDDCWMTAE
KSEKCYHECL IHPALCCSTR IDNILIIGGG DGGSARECLK YKEVKSIDLV EIDLRVIELS
QKYLPTIGGN AWSDSRLNLQ IKNGIDWVKH TKENSYDVII IDGADPIGPS KELFSNSFLK
DCKRILKPGG VLATQSESPE SFQEIHINIV KILREIFDYA DPMYGSVSIY PSGLWSWAFA
SMENPKYIYP KKSRVKEISE NCQVWSERWQ QGAFNTIPAF IERELAKI
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