Gene NATL1_21421 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21421 
Symbolole1 
ID4780771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1799954 
End bp1800733 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content39% 
IMG OID640085439 
ProductFatty acid desaturase, type 1 
Protein accessionYP_001015962 
Protein GI124026847 
COG category[I] Lipid transport and metabolism 
COG ID[COG1398] Fatty-acid desaturase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.661298 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTGCAA TACATGCTCT AACAATATTT ACCTTGCAAG CTCAATTTTG GAGCTGGCTA 
GCATTTTCTG GATTTATTTT CTTGTATTGG GTAACTGCTT GCTTGGGAGT AACGACAGGA
TATCATCGCC TTCTCTCACA TCGTTCTTTT CAAGTTCCAA AATGGCTTGA AAGATTTTTT
GCAACTTGTG GAGCACTAAG TTGCCAACAT GGACCAATTG ATTGGGTCGG TCTTCATAGG
CATCATCATA CTTTTTCCGA TACTGAAGCT GATCATCATG ACAGTAATAA AGGATTCTGG
TGGAGTCACA TGGGATGGAT GTTTGAAGAT GTACCTGCCA TGAAAGCGGT ACCAAGACTC
TCTGGAGATT TAATCAAAGA TCCTTACTAT CGCTTCTTAA ATAAAAATTT TTTACTTTTG
CAACTACCCT TAGGCGCAAC ACTTTATTTA ATTGGACAAT CAGCTGGAGT TGGAGGTTGG
GCAATGGTCC TATGGGGAAT ACCTCTAAGA CTCGTTTTTG TTTATCACAT AACTTGGCTA
GTTAATTCAG CAACTCATTG TTGGGGAACT ATTGCTTATG AGAGTGGGGA TAATTCAAAA
AATAATAAAT GGGTCGCAGC TCTTACATTT GGTGAAGGAT GGCACAATAA TCATCATGCT
TTCCCTAATT CAGCAAAGCA TGGCCTTCAA CGCAAACAAA TAGATCTAAC TTGGCAACAC
ATACGTTTTT TGAAAGCAAT TGGCTTAGCT AAAAAAATTA GACTCCCCGC CGCGTCGTAA
 
Protein sequence
MLAIHALTIF TLQAQFWSWL AFSGFIFLYW VTACLGVTTG YHRLLSHRSF QVPKWLERFF 
ATCGALSCQH GPIDWVGLHR HHHTFSDTEA DHHDSNKGFW WSHMGWMFED VPAMKAVPRL
SGDLIKDPYY RFLNKNFLLL QLPLGATLYL IGQSAGVGGW AMVLWGIPLR LVFVYHITWL
VNSATHCWGT IAYESGDNSK NNKWVAALTF GEGWHNNHHA FPNSAKHGLQ RKQIDLTWQH
IRFLKAIGLA KKIRLPAAS