Gene NATL1_21321 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21321 
Symbol 
ID4780887 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1789836 
End bp1790393 
Gene Length558 bp 
Protein Length185 aa 
Translation table11 
GC content30% 
IMG OID640085429 
Productputative photosystem I assembly related protein Ycf37 
Protein accessionYP_001015952 
Protein GI124026837 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG5010] Flp pilus assembly protein TadD, contains TPR repeats 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.285628 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAGTTA ATCTTCCTCA AACTTATTTA ATAGGACTGT GTTTGCTTTT AGTAATTATT 
GCTATTTTAG TAGGAAGACA ACTTTATAAA GTAAGAAAAG ATGAAATGAA GCTAATCAAA
TTAGAAAAAG AAGATTCAAA TACAAAAGAA GATTCAGCAA AAATGTATGA ATTGGCATCT
GTTCAATTAA AGAAAAGATT ATATCCTCAA GCTACATCAA CCTTAAAACA GGCCTTAAAG
AAACTTGATG GGGAGCCAGA AGAAGCTAAA GCACTAATAG AAAATGCATT AGGCTTTGCA
CTCGCTGCTC AAAATGACTT TAAATCAGCA GTTATTCATT ACAAAAAAGC ATTAACAGCA
AAATCCGAAT ATCCAGTAGC TCTAAATAAT CTCGGTTTTG CTTATCAACG CTTGCTCAAA
GAAGACGAAG CTTATAAAAA TTATCAAGAG GTTTTAAAGT TAGATCCTAA TAATAAAACT
GCGATCTCTC AAATTAAAAG ACTTGAACGT ATAGTTGGAA AAGATAAAGA TAAATTATCG
AATAAAAAAG GCTTCTAA
 
Protein sequence
MIVNLPQTYL IGLCLLLVII AILVGRQLYK VRKDEMKLIK LEKEDSNTKE DSAKMYELAS 
VQLKKRLYPQ ATSTLKQALK KLDGEPEEAK ALIENALGFA LAAQNDFKSA VIHYKKALTA
KSEYPVALNN LGFAYQRLLK EDEAYKNYQE VLKLDPNNKT AISQIKRLER IVGKDKDKLS
NKKGF