Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_21321 |
Symbol | |
ID | 4780887 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1789836 |
End bp | 1790393 |
Gene Length | 558 bp |
Protein Length | 185 aa |
Translation table | 11 |
GC content | 30% |
IMG OID | 640085429 |
Product | putative photosystem I assembly related protein Ycf37 |
Protein accession | YP_001015952 |
Protein GI | 124026837 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG5010] Flp pilus assembly protein TadD, contains TPR repeats |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.285628 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATAGTTA ATCTTCCTCA AACTTATTTA ATAGGACTGT GTTTGCTTTT AGTAATTATT GCTATTTTAG TAGGAAGACA ACTTTATAAA GTAAGAAAAG ATGAAATGAA GCTAATCAAA TTAGAAAAAG AAGATTCAAA TACAAAAGAA GATTCAGCAA AAATGTATGA ATTGGCATCT GTTCAATTAA AGAAAAGATT ATATCCTCAA GCTACATCAA CCTTAAAACA GGCCTTAAAG AAACTTGATG GGGAGCCAGA AGAAGCTAAA GCACTAATAG AAAATGCATT AGGCTTTGCA CTCGCTGCTC AAAATGACTT TAAATCAGCA GTTATTCATT ACAAAAAAGC ATTAACAGCA AAATCCGAAT ATCCAGTAGC TCTAAATAAT CTCGGTTTTG CTTATCAACG CTTGCTCAAA GAAGACGAAG CTTATAAAAA TTATCAAGAG GTTTTAAAGT TAGATCCTAA TAATAAAACT GCGATCTCTC AAATTAAAAG ACTTGAACGT ATAGTTGGAA AAGATAAAGA TAAATTATCG AATAAAAAAG GCTTCTAA
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Protein sequence | MIVNLPQTYL IGLCLLLVII AILVGRQLYK VRKDEMKLIK LEKEDSNTKE DSAKMYELAS VQLKKRLYPQ ATSTLKQALK KLDGEPEEAK ALIENALGFA LAAQNDFKSA VIHYKKALTA KSEYPVALNN LGFAYQRLLK EDEAYKNYQE VLKLDPNNKT AISQIKRLER IVGKDKDKLS NKKGF
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