Gene NATL1_21241 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_21241 
Symboltig 
ID4780941 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1780630 
End bp1782048 
Gene Length1419 bp 
Protein Length472 aa 
Translation table11 
GC content37% 
IMG OID640085421 
Producttrigger factor 
Protein accessionYP_001015944 
Protein GI124026829 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0544] FKBP-type peptidyl-prolyl cis-trans isomerase (trigger factor) 
TIGRFAM ID[TIGR00115] trigger factor 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTGCTG CAAAATTAAA CGTAAAAACC AGTTCAAAAC CCAATAGCAG AATTGCTGTT 
GAGGTAGAAG TGCCCGCAAA TCGATGCAAA AATAGTTACG ACGAAGCCTT AAGCAAACTC
AGCAGATCTA TCTCAATCCC AGGCTTTCGC AAAGGTAAAG TCCCAAAAAC AGTAGTAATC
CAGCAACTTG GAGTCAAAAG AATACAGGCC TCTGCACTGG AATCACTATT GCAAAAAGTA
TGGACAGAAA CCTTAGATCA AGAAGGAATA GAACCTTTGT GTGAGCCTGA ACTAGAAGAT
GGCTTTGAGA CTATTTTGGA GAATTTCAAC CCTGAAAAAA CTCTAATATT GAAACTTGAA
ACTGACATAA CACCTATCCC AACTTTAAAA AAATCATCAG GTCTAACTGC TGAAGTAGAA
AATCTAATAT TTGATCCCAA AAAAGTTGAT GAACTGATTG AGCAATCCCG AGCTCAACTA
GCAACTAAAG TCCCAGTTAC TGATCGTGCC GCACAAAAAG GAGATATTGC CTTAGTCAGC
TTTAAAGGAA GTTTCTCAGA TGATGGAAGC GAAATTGAAG GGGGAAGTGC AGATTCAATA
GAAATAGAAC TTGAGCAAGG CAGAATGATC CCTGGTTTTA TTGAGGGAGT GATTGGAATG
AATATCAACG ATGAAAAAAT ATTGAAATGT GAGTTTCCCA AGGATTATCA TCAAGAAGAA
GCCAAAGGCA GAAAAGCCGA ATTCAATGTC AGTTTGGAAG ATTTAAAAAT CAAGGAATTA
CCTGAACTCA ATGATGAGTT TGCTAAGCAA GCAAGTGACA AAGAAAATAT GTCTGACTTA
CGCGCAGATC TTGAAAAGAG ACTCAAAGAG GACAATGACA GAAAACAAGC GAAAACTCGT
CAAGACTCAC TTCTCGATGT TTTGGTCAAA GAACTTGAAG TTGATATACC AAAAAGTCTT
ATTGACCAGG AAGTTCGAAT AATTGTTGAA CAAACAGCTC AAAATTTTGC TCAACAGGGC
ATTGATGTCA AATCAATGTT TACTCCAGAG CTTGTGAAAT CACTCATGGA GTCTTCAAAA
GGCGAAGCAG AGAAAAAGCT TCGTCAAAAA TTTGCTCTAA AGGCTTTAGC TAAGTCGGAA
AAAATTGAAG TTTCAGACAA AGAAATCAAC TCAAAACTTG AACAAGTAGA AGCTGATATC
AAACTTTCAA ACGAAAAAAA TATCGACGCA AAACGTCTTA AAGAAGCTAT TACTGATGAT
TTATTGCAAG AAAAATTGTT TGCTTGGCTT GAAGAAAATA ATACTGTTGT AGAAAAACCC
CCAGAAAAAG CTAGGGATCA AATCAAGGAG AAAAGCTCTA AAAAGAAAAC AACAAAAACA
AATAAAGAAA AGAAAAGTTC TAAAACACCC AAATCCTAG
 
Protein sequence
MSAAKLNVKT SSKPNSRIAV EVEVPANRCK NSYDEALSKL SRSISIPGFR KGKVPKTVVI 
QQLGVKRIQA SALESLLQKV WTETLDQEGI EPLCEPELED GFETILENFN PEKTLILKLE
TDITPIPTLK KSSGLTAEVE NLIFDPKKVD ELIEQSRAQL ATKVPVTDRA AQKGDIALVS
FKGSFSDDGS EIEGGSADSI EIELEQGRMI PGFIEGVIGM NINDEKILKC EFPKDYHQEE
AKGRKAEFNV SLEDLKIKEL PELNDEFAKQ ASDKENMSDL RADLEKRLKE DNDRKQAKTR
QDSLLDVLVK ELEVDIPKSL IDQEVRIIVE QTAQNFAQQG IDVKSMFTPE LVKSLMESSK
GEAEKKLRQK FALKALAKSE KIEVSDKEIN SKLEQVEADI KLSNEKNIDA KRLKEAITDD
LLQEKLFAWL EENNTVVEKP PEKARDQIKE KSSKKKTTKT NKEKKSSKTP KS