| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21201 |
|---|
| Symbol | |
|---|
| ID | 4780956 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1776515 |
|---|
| End bp | 1778464 |
|---|
| Gene Length | 1950 bp |
|---|
| Protein Length | 649 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 640085417 |
|---|
| Product | metallo-beta-lactamase superfamily hydrolase |
|---|
| Protein accession | YP_001015940 |
|---|
| Protein GI | 124026825 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0595] Predicted hydrolase of the metallo-beta-lactamase superfamily |
|---|
| TIGRFAM ID | [TIGR00649] conserved hypothetical protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACATCAA GTTCAATGAA TTCTCAAGGT TCAAAAAATA ATCAAACCAA ATCTCCTTGT
TTGAGGATTA TTCCCTTAGG CGGCCTCGGA GAAATCGGTA AAAATACTTG CGTCTTTGAA
TACGGAAACG ACATCATGAT TCTTGATGCT GGTCTTGCTT TCCCAACTGA TGGGATGCAT
GGAGTAAATG TTGTCATGCC AGACACTACT TATCTACGAG AAAATCAAAA TCGAATAAGA
GGTTTGGTGG TTACTCATGG GCATGAGGAT CATATTGGTG GAATTTCTCA TCATTTAAAG
AACTTTAATA TTCCAATTGT TTACGGCCCT CCCCTAGCTA TGTCTATGCT GAGGGGGAAA
ATGGAGGAAG CTGGAGTTGC TGATCGGACA ACAATACAAG TATGTGGACC AAGAGAGGTT
ATTAAAGTTG GGCAACATTT TTCAGTTGAA TTTGTAAGAA ATACGCATTC AATTTCTGAT
AGTTATTCCT TTGCAGTTAC GACTCCAGTG GGAGTAGTAT TTTTCACTGG AGATTTTAAG
TTCGACCATA CCCCACCTGA CGGACAGCCT GCAGATTTAG CCAGGATGGC TCACTATGGA
GACAAAGGTG TTCTTTGCCT TCTATCTGAT TCAACCAACT CTGAAGTTAC AGGATTCACG
CCCTCTGAAT ATTCTGTTTT TCCAAATTTA GATAGATACA TTGCTACTGC TGAAGGCAGA
GTTATGGTTA CTACTTTTGC TAGTTCAACT CATCGTGTGG CGATGCTTTT GGAGCTAGCA
ATGAAAAACG GTAGAAAGGT TGGCTTGCTA GGTCGTTCAA TGCTGAATGT GGTTGGTAAG
GCAAGGGAAC TTGGTTATAT GCGTTTTCCT GATGATTTAT TTTTTCCAAT TAAACAGATC
AGAGATTTGC CTGATAGAGA GACTTTTTTA TTGATGACAG GTAGTCAAGG AGAATCAATG
GCTGCTTTAA GCCGTATTGC TAGAGGCGAG CATCAACATG TTCAATTGAA AACTAGTGAT
ACTGTTATTT TTTCTGCTAG CCCTATTCCT GGGAACACTA TTTCTGTGAT GCATACGATT
GATAAATTAA TCAAACTGGG TGCAAAAGTA ATTTATGGCA AAGATAAGGG GATTCATGTT
TCAGGCCATG GATGCCAAGA AGATCAAAAA TGGATGCTTG GATTAACAAG ACCTAAATAC
TTCATTCCTG TTCATGGTGA GTACAGAATG CAAGTTTTAC ATGGGAAAAC TGCTGTCTCA
ATGGGGGTGC ATCCAGAGAA TGTATTGGTG ATGGAAAATG GGGACGTTGC TGAATTAAGA
CCAGATTCTC TATTGCAAGG CTCACCAGTT AAATCTGGAG TGGAATTACT CGATTCTTCT
AGAACGGGGA TTGTGGATAC TCGAGTATTA AAAGAACGTC AGCAACTTGC TGATGATGGA
GTTATCACCG TTCTTACTCC AATTAGTACT GATGGGGTGA TGGTTGCACC ACCTAGGGTA
AATCTTCGTG GTGTTATCAC TAATGTTGAT GCCAAAACCA TGGTTAATTG GACTGAAAGA
GAGATTAATT GGGTCTTAGA AAATCGATGG AAACAGCTCG TTCTTAAGAC TGGGGGAAAA
TCAGTTGAGG TCGATTGGAT AGGATTGCAA AGAGAGGTTG AATCAGGATT ATCTCGTCGG
TTGAGAAGAG AGGTTCAAGC GGAGCCTTTA GTTCTTTGCC TTGTTCAACC TGCTCCAGGA
GGAACTCGCG CATATAAACC TCAACTTGAT CAACAGCAAG ATTCACGACA AGTAGTGAAG
AAAACTACTG ATAAAGCCCC TAAGACGACA AAGGCATCCG TAGCAAATCA AGAGACAAGT
TCACCAGCAG AACAAAAAAC AAATAAGGAA CCTAATGCTG AGGAAATGCC CACAGGAAGA
ACAAGACGTC GCAGATCAGC AATTAGCTGA
|
|---|
| Protein sequence | MTSSSMNSQG SKNNQTKSPC LRIIPLGGLG EIGKNTCVFE YGNDIMILDA GLAFPTDGMH
GVNVVMPDTT YLRENQNRIR GLVVTHGHED HIGGISHHLK NFNIPIVYGP PLAMSMLRGK
MEEAGVADRT TIQVCGPREV IKVGQHFSVE FVRNTHSISD SYSFAVTTPV GVVFFTGDFK
FDHTPPDGQP ADLARMAHYG DKGVLCLLSD STNSEVTGFT PSEYSVFPNL DRYIATAEGR
VMVTTFASST HRVAMLLELA MKNGRKVGLL GRSMLNVVGK ARELGYMRFP DDLFFPIKQI
RDLPDRETFL LMTGSQGESM AALSRIARGE HQHVQLKTSD TVIFSASPIP GNTISVMHTI
DKLIKLGAKV IYGKDKGIHV SGHGCQEDQK WMLGLTRPKY FIPVHGEYRM QVLHGKTAVS
MGVHPENVLV MENGDVAELR PDSLLQGSPV KSGVELLDSS RTGIVDTRVL KERQQLADDG
VITVLTPIST DGVMVAPPRV NLRGVITNVD AKTMVNWTER EINWVLENRW KQLVLKTGGK
SVEVDWIGLQ REVESGLSRR LRREVQAEPL VLCLVQPAPG GTRAYKPQLD QQQDSRQVVK
KTTDKAPKTT KASVANQETS SPAEQKTNKE PNAEEMPTGR TRRRRSAIS
|
|---|
| |