| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21111 |
|---|
| Symbol | ribH |
|---|
| ID | 4781093 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1765195 |
|---|
| End bp | 1765671 |
|---|
| Gene Length | 477 bp |
|---|
| Protein Length | 158 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640085408 |
|---|
| Product | 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| Protein accession | YP_001015931 |
|---|
| Protein GI | 124026816 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0054] Riboflavin synthase beta-chain |
|---|
| TIGRFAM ID | [TIGR00114] 6,7-dimethyl-8-ribityllumazine synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCGACAA TAGAGGGTAC CTTTGAAAAA TCATCCTCAT TAAAAGTAGC TATTGTTATA
GCTAGATTTA ATGATCTAAT TACTAATAAG CTCTTAAGCG GATGTTTAGA TTGTTTGTCA
CGTCACGGTA TTGATGTCTC AGAGTCAAGT AATCAAATTG ATGTGGCATG GGTTCCAGGT
TCTTTTGAAT TGCCAATTAT TTCTCAAGAA CTTGCTAGAA CGGGAAAATA TGAGGTGTTA
ATTACATTGG GTGCAGTGAT AAGAGGAGAT ACTCCTCACT TTGATGTTGT TGTATCAGAG
GCGAGCAAAG GGATAGCTAC TGTATCAAGA GAAACAGGAG TACCAATTAT CTTCGGGGTC
TTAACTACTG ATACTATGCA GCAAGCATTG GAGCGGGCGG GAATTAAAAA TAATCTTGGG
TGGAGTTATG CTTTGCAAGC CCTCGAGATG GGTTCTTTAA TGAAGGCGGT GACTTAA
|
|---|
| Protein sequence | MATIEGTFEK SSSLKVAIVI ARFNDLITNK LLSGCLDCLS RHGIDVSESS NQIDVAWVPG
SFELPIISQE LARTGKYEVL ITLGAVIRGD TPHFDVVVSE ASKGIATVSR ETGVPIIFGV
LTTDTMQQAL ERAGIKNNLG WSYALQALEM GSLMKAVT
|
|---|
| |