| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21091 |
|---|
| Symbol | rfbA |
|---|
| ID | 4781102 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1763544 |
|---|
| End bp | 1764434 |
|---|
| Gene Length | 891 bp |
|---|
| Protein Length | 296 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 35% |
|---|
| IMG OID | 640085405 |
|---|
| Product | dTDP-glucose pyrophosphorylase |
|---|
| Protein accession | YP_001015929 |
|---|
| Protein GI | 124026814 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.743902 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGTA AAGGAATTAT TCTCGCTGGC GGAACTGGTT CGCGTCTGGC GCCATTAACT
AATTCAGTAA GCAAGCAGCT ACTTCCTGTT TACGATAAAC CGATGATTTT CTATCCTTTA
TCAACCTTAA TGTTGGCTGG GATTAGAGAA ATTTTAATAA TTACTACTCC TATCGATAGG
AATCAATTTG AAAGATTGCT TGGTAATGGA TCAGATTTTG GGATATCTAT AAAATATGAA
GAACAGCAAT CTCCTGAGGG TATTGCACAA GCATTTTTGA TTGGTGAAAA GTTTTTAAAT
GGTTCTCCGG TTGCTTTGAT TTTAGGTGAC AATCTTTTCC ATGGTCATGA ATTTAGAAAA
CAATTAAACA AGGCTAATAA TCTAATTGAA TTATCTACTA TTTTTGCTTA TCCAGTCATA
GATCCTCAGA GATATGGTGT AGTTGTATTT GATAATGAAG GTAATGCCAT AGAGATTGAG
GAGAAACCTG AAATACCATC TAGCCGGTTC GCTATTACTG GCTTATATTT TTACGATTCA
TCAATAGTTG ATAAAGCTAA AAAAATCTCT CCCTCATCAA GGGATGAACT AGAGATCACA
TCAATTAATC AGCTATATCT TCAAGAGAGA CGTTTGAAAG TTGAGTTAAT GGGGAGAGGA
ATGGCTTGGT TAGACACCGG TACATTCGAT TCCTTGCAAG AAGCAGGCGC ATTTATTAAA
ACACTCGAAA ATAGACAAGG ATTAAAAATA GGATCTCCTG AGGAAGTTGC TTGGAGAAAT
TGTTGGATAG ACAAGGATCA ATTAAAGAAG AAAGCAAATC AATACATGAA CAGTGGTTAT
GGTGATTACT TATTTGAATT AATTTCTAAG CCTCATAGTA ATTTATTTTA A
|
|---|
| Protein sequence | MKRKGIILAG GTGSRLAPLT NSVSKQLLPV YDKPMIFYPL STLMLAGIRE ILIITTPIDR
NQFERLLGNG SDFGISIKYE EQQSPEGIAQ AFLIGEKFLN GSPVALILGD NLFHGHEFRK
QLNKANNLIE LSTIFAYPVI DPQRYGVVVF DNEGNAIEIE EKPEIPSSRF AITGLYFYDS
SIVDKAKKIS PSSRDELEIT SINQLYLQER RLKVELMGRG MAWLDTGTFD SLQEAGAFIK
TLENRQGLKI GSPEEVAWRN CWIDKDQLKK KANQYMNSGY GDYLFELISK PHSNLF
|
|---|
| |