| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | NATL1_21041 |
|---|
| Symbol | |
|---|
| ID | 4781129 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Prochlorococcus marinus str. NATL1A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008819 |
|---|
| Strand | - |
|---|
| Start bp | 1748701 |
|---|
| End bp | 1750359 |
|---|
| Gene Length | 1659 bp |
|---|
| Protein Length | 552 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640085400 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001015924 |
|---|
| Protein GI | 124026809 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG0438] Glycosyltransferase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 0.331475 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTACAA ACAGTACTGC AATTTATTAT CAATCTGATG CCTATACAAC TAGCAAGCAG
AAGCTCATGG GTCGTAATGC TGCTGGTGAA TCTTTTCTTA GGGCTTATTT TAAATATGAT
AATAGTCATA ATCTTTATGT TTATCCTGTA TCTCTAGAGG ATTTAGATTG TTTTAAAAGG
AAAGCCATTG CTTACAATCG TCATGAACCT ATTGAGTGTA TAACCAAGAG ATCTTTAACT
AAGCTTGTTG ATGTTGGAAA TCTTTTTGTA CCTGGTCCAG GTCTTGATCA ATTTGCTCAT
GAACGTTGTT TCTCTGGTCA TAATTCTTGG AGTCTTTGCG GTATCACACA TACAACCAGC
AGTATTAACG CTATGGATTG TATTTCCTCT CTCGCCACTG CTCCTATTCA AGAATGGGAT
GCTTTGATTT GTACTAGTAA CGCTGTTAAA AAACATGTTA ATGAAACTCT TAATTCCCAA
TTTGAATATT TAAAATATCG TTTAGGAATT TCAAAGCTCG TATTACCCCA ATTACCCGTT
ATTCCTCTTG GAATTCATAC CTCTGACTTT CATTTTACCG ATTCCGAAAA GTTTTCTTCT
AGAAATACTT TGGGCATTGA TGATAATTCA ATTGTGATTT TATACACAGG TCGATTATCT
TTTCATGCTA AGGCTCATCC CCTAGCGATG TATCAAGCTT TGGAGTTATC TTCAAAACAA
ACAAATATTC CTATTGTGTT AATTGAATGT GGATGGCATG CGAATCAGTC AATAGCAGAT
TCTTTCACTG AAGCAGCTCA AAGATTTTGC CCCTCGATAA AAGTACTTCA TTTAGATGGT
CGCATTAATA AAAATCGTTC TTTGGCTTGG TCTTCTGCTG ATATCTTCTG TTCTTTGCCT
GATAATATTC AAGAAACTTT TGGAATCGTT CCCATTGAGG CAATGGCTGC GGGTTTACCC
GTAGTAGTAT CTGATTGGGA TGGCTATAAA GATACAGTTA GAGATGAAAT AGATGGTTTT
AGAATTCCAA CGTTAATTCC CGAAGAAGGT CTTGGTGCGG ATCTTATGCA AAGATATTCT
CTGGGTATTG ATACTTATGA TATGTATTGT GGTCATACCT CAAGTCTGAT TTCCGTTGAT
GTTTTATCTG CTAATAGAGC ATTTACAAAA TTGATTCAAT CACCTTCTCT TCGAGTCAAG
ATGGGTGCAT CTGGTCTTAA AAGAGCACGA GAAATGTATG ACTGGTCAGT TATTTATAAA
CAGTATGATG ACCTTTTTAA TCATTTAAAC CTGATTAGAA AGAGCAGTGT ACTTAATGAT
TTTGACAAAC AACGTTTTTG GCCCGGACGA GTTAATCCCT TTCAGGGTTT TTCAGATTAT
GCTACCAATC AACTTTCATT AAATTCAAAA GTGAGTTTAG TTGATGATGA TTTTCAAATT
ACATTTCAAC GATACATTGA TATTAAGGAT CTAAAAATGG TCTCTTTTGC TTCATATATT
TTACCAACAC ATGAAGAAGT TAAATGTATA TTTAATAATC TTAGTAAAGC TCCAATGAAA
GCTTGTGATC TATTAATTCC ATTTGAACTA AAAAGAAGAC CTTTCATCTT AAGAACTTTA
GTCTCTTTAC TCAAGTTTAA TCTTATTAAA CTAGTCTAA
|
|---|
| Protein sequence | MSTNSTAIYY QSDAYTTSKQ KLMGRNAAGE SFLRAYFKYD NSHNLYVYPV SLEDLDCFKR
KAIAYNRHEP IECITKRSLT KLVDVGNLFV PGPGLDQFAH ERCFSGHNSW SLCGITHTTS
SINAMDCISS LATAPIQEWD ALICTSNAVK KHVNETLNSQ FEYLKYRLGI SKLVLPQLPV
IPLGIHTSDF HFTDSEKFSS RNTLGIDDNS IVILYTGRLS FHAKAHPLAM YQALELSSKQ
TNIPIVLIEC GWHANQSIAD SFTEAAQRFC PSIKVLHLDG RINKNRSLAW SSADIFCSLP
DNIQETFGIV PIEAMAAGLP VVVSDWDGYK DTVRDEIDGF RIPTLIPEEG LGADLMQRYS
LGIDTYDMYC GHTSSLISVD VLSANRAFTK LIQSPSLRVK MGASGLKRAR EMYDWSVIYK
QYDDLFNHLN LIRKSSVLND FDKQRFWPGR VNPFQGFSDY ATNQLSLNSK VSLVDDDFQI
TFQRYIDIKD LKMVSFASYI LPTHEEVKCI FNNLSKAPMK ACDLLIPFEL KRRPFILRTL
VSLLKFNLIK LV
|
|---|
| |