Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_20961 |
Symbol | gmd |
ID | 4781168 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1740047 |
End bp | 1741099 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 35% |
IMG OID | 640085392 |
Product | GDP-D-mannose dehydratase |
Protein accession | YP_001015916 |
Protein GI | 124026801 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1089] GDP-D-mannose dehydratase |
TIGRFAM ID | [TIGR01472] GDP-mannose 4,6-dehydratase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.456617 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | GTGAGTCAAA AGAAAATTGC TTTAATCACT GGCATAACTG GTCAAGATGG AAGCTACCTA GCGGAACTTC TACTTGATAA AGGATATAAA GTTCATGGAC TCGTTAGGAG ATCAAGTCAG AAAAATACCA ATCTTTTAGA TAACATTTTA AATAGTCAGC ACAATAAAAA TCTTGAACTT CACTATGGTG ATTTAACACA GAGCACCAAT ATCCTTAGAA TAATTGAAAA TATACAACCA GATGAGATCT ACAATTTAGG AGCGCAAAGC CATGTCCAAG TAAGTTTCGA GACGCCAGAA TATACTGCCC AAACTGATGC ATTAGGTCCT CTAAGGATAC TTGAAGCTAT TAGGATTCTG CAACTCACCA AAAAAACAAA AATTTATCAA GCCAGTACAT CAGAATTGTA TGGACTGGTA CAAGAAACAC CTCAAAACGA GAGAACACCC TTTTACCCAA GAAGTCCATA TGGAGTCGCG AAACTTTATG CATATTGGAT AACAATCAAT TATCGAGAAT CGTATGGGAT TTTCGCTTGT AACGGAATTT TATTTAATCA TGAATCTCCT AGACGTGGAG AAAATTTTGT AACAAGAAAA ATCACCAAAG GATTGTGCGA AATCAACAGG GGTTCAACTG ACTGCCTATA TCTAGGGAAT ATAGATTCTT TGAGGGACTG GGGGCATGCA AAAGATTATG TCGAAATGCA GTGGATGATG CTTCAACAAG AAAAACCTGA AGATTATGTG ATTTCAACAG GTAAACAAAC TTCTGTTAGG AGATTTGTTG AATTATGTGC AGAACATTTA AATTGGGGCG GAATTATTTG GGAAGGCAAG GGGATAGATG AAATAGGGAA GAGAAAAGAT AATAAACAAG TAATTATCAG GATTGATCCA AATTTATTTC GACCCGCAGA AGTGAATAGC CTATTGGGAG ACTCAGAAAA AGCCTACAAA AAACTTGGTT GGAAACCTAA ATATAATATC GAGAGTCTGA TAATTGAAAT GATCGAAGAA GATAAAATAG ACAAGAAATA TAATTATAAT TAA
|
Protein sequence | MSQKKIALIT GITGQDGSYL AELLLDKGYK VHGLVRRSSQ KNTNLLDNIL NSQHNKNLEL HYGDLTQSTN ILRIIENIQP DEIYNLGAQS HVQVSFETPE YTAQTDALGP LRILEAIRIL QLTKKTKIYQ ASTSELYGLV QETPQNERTP FYPRSPYGVA KLYAYWITIN YRESYGIFAC NGILFNHESP RRGENFVTRK ITKGLCEINR GSTDCLYLGN IDSLRDWGHA KDYVEMQWMM LQQEKPEDYV ISTGKQTSVR RFVELCAEHL NWGGIIWEGK GIDEIGKRKD NKQVIIRIDP NLFRPAEVNS LLGDSEKAYK KLGWKPKYNI ESLIIEMIEE DKIDKKYNYN
|
| |