Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_20941 |
Symbol | |
ID | 4779328 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1735572 |
End bp | 1736948 |
Gene Length | 1377 bp |
Protein Length | 458 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640085390 |
Product | hypothetical protein |
Protein accession | YP_001015914 |
Protein GI | 124026799 |
COG category | [G] Carbohydrate transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1134] ABC-type polysaccharide/polyol phosphate transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.140726 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATTAATA TTGACGCAAA TGAATTGCAA AAACTATATA TCGCCTATTT TGGAAGACCT GGAGATCCAT CTGGCATAAA TTATTGGCTT TCACGTTCTA ATCAATCACT TGATCTAACG GGAATATCAA ATGAATTATC TATGCAAGAT GAATATATTA AATATACTTC TTATGATAAA TCTTTTGATT TTAAGATTAA CAAATTATAT TTGAATTTAT ACAATAGAAA AGCTGATTTT GATGGTTTAA ATTATTGGAT GAAGATGACT AATAGTAAGG AATATAAGAT TTCAGATATT GTATATGAAT TAGTTTTTTC TTCTAGTAAG CCTTATTCGG TTGACTTAAA GCAAGAGAAA AAGGATAGTC ATATTCTTCA AAATAAAATT TTTGCGGCAG AACTATTTAC TAAGCAAATT AGTAAAAGTA TTACTTTAAT TAATTTATAT AAACCCGATT CAATATCTCC TTGGATTTCA GGTAACTCAT TTATAAGAGT ATCTAATTTC TTCAGTCATA TTAATGAGAA GACGGTCTCA ATAGATCATA TAAATAATTT TATTGCTTCT TTATCTGACA CTCCAGTAAG CATACTCAAT GAGCCAGCTA TAGAAATTAA AGATACTTCA CTTTCTATTC CTATTTATCA AACAGAAAAT AGATCTTTTG CAAAAAAAAT TACAAAAAAT GTAATAAATA TTACAGGTGG AGCTCTTAGG AAGTCTAAAA ATAAGACTAG TATTATTGCA CTAAATAATA TTAATTTGAC AATCATGAAG GGAGAGAGAG TCGGACTGAT TGGTCATAAT GGGTCCGGAA AAAGTAGTTT TTTGAGGTTG ATTTCAGGTA TTTATATCCC CACGAGTGGA AATATAAATG TTTTAGTAGA TGTGTATCCT ATGCTCCAAA AAACTTTTCT GACTAGTACA GAGCTATCTG GAATCGATGC TTGTAAAGCG CATTATTTAC TTAAAAACCA TAGCCTTGAT GGCTTTGAAT CTTTCTTGAA TGAAATAACA GAATTTTCGG GCCTTGGCTC ATATATCTCT TTACCTATAA AAACTTACAG TGAGGGTATG TCTGCAAGGT TGGTTTTTTC AATTCTTACT TCAACTCCTC ATGAATGTTT AGCAATAGAT GAAGGTTTCG GTACTGGTGA CGCAGACTTT TGTGATAGAG CTGAAGAAAG AATGAAACAA TTTATGGAAT CCGCCGCAAC CTTATTTTTG GCTAGTCATT CGGAGGAACT TTTAAAACAG TTTTGTAATA GAGGTATTGT TTTTAGCCAT GGATCAATTG TATATGATGG CCCTTTAGAT GCTGCCTTGA ATTATTATCA TACCCATGAC TATTATCGTA AAAATGTTGT TGGATAA
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Protein sequence | MINIDANELQ KLYIAYFGRP GDPSGINYWL SRSNQSLDLT GISNELSMQD EYIKYTSYDK SFDFKINKLY LNLYNRKADF DGLNYWMKMT NSKEYKISDI VYELVFSSSK PYSVDLKQEK KDSHILQNKI FAAELFTKQI SKSITLINLY KPDSISPWIS GNSFIRVSNF FSHINEKTVS IDHINNFIAS LSDTPVSILN EPAIEIKDTS LSIPIYQTEN RSFAKKITKN VINITGGALR KSKNKTSIIA LNNINLTIMK GERVGLIGHN GSGKSSFLRL ISGIYIPTSG NINVLVDVYP MLQKTFLTST ELSGIDACKA HYLLKNHSLD GFESFLNEIT EFSGLGSYIS LPIKTYSEGM SARLVFSILT STPHECLAID EGFGTGDADF CDRAEERMKQ FMESAATLFL ASHSEELLKQ FCNRGIVFSH GSIVYDGPLD AALNYYHTHD YYRKNVVG
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