Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_20901 |
Symbol | infC |
ID | 4779060 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | + |
Start bp | 1732321 |
End bp | 1732929 |
Gene Length | 609 bp |
Protein Length | 202 aa |
Translation table | 11 |
GC content | 39% |
IMG OID | 640085386 |
Product | translation initiation factor IF-3 |
Protein accession | YP_001015910 |
Protein GI | 124026795 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0290] Translation initiation factor 3 (IF-3) |
TIGRFAM ID | [TIGR00168] translation initiation factor IF-3 |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.240556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.63143 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCACCAC GTCCCCGTTT TGATCGTCAC GCTCCAGAAA GGGAGTTGCC CAACATTAAT GAAAGAATCA GCTATTCAAG CTTAAGGGTT GTTGATTCTG ATGGCACTCA ACTTGGTGTC ATCAGTCGAG AGGAAGCTCT AGAGGTCGCT AAAGAGAGAG AATTAGATCT TGTTTTGGTA AGTGAGAAGG CCACTCCTCC TGTATGCCGG ATAATGAATT ATGGAAAATT CAAGTTTGAG CAAGAAAAAA AAGCAAAGGA AGCTAAGAAA AAATCACACC AAACAGAAGT TAAAGAAGTA AAAATGAGGT ATAAAATTGA CCAGCATGAT TATCAGGTCC GTATTAGTCA GGCCACGAGA TTCTTAAAAG CTGGAGATAA AGTCAAATGC ACGGTTATAT TCAGAGGCCG CGAAATTCAA CACACTGCTC TAGCAGAAAC TCTTCTAAAA AGAATGTCAA AGGATTTGGA AGAAAAGGCT GAAGTACAAC AATCCCCTAA AAGAGAGGGA AGAAATATGA TTATGTTTTT AACTCCGCGT AAAACTCCTC TTTTAAAGAA GGAGAGTGAA ACAACTGAAC CAAAAAAAGC TTTGAGATCA ATTAATTAA
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Protein sequence | MPPRPRFDRH APERELPNIN ERISYSSLRV VDSDGTQLGV ISREEALEVA KERELDLVLV SEKATPPVCR IMNYGKFKFE QEKKAKEAKK KSHQTEVKEV KMRYKIDQHD YQVRISQATR FLKAGDKVKC TVIFRGREIQ HTALAETLLK RMSKDLEEKA EVQQSPKREG RNMIMFLTPR KTPLLKKESE TTEPKKALRS IN
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