Gene NATL1_20901 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20901 
SymbolinfC 
ID4779060 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1732321 
End bp1732929 
Gene Length609 bp 
Protein Length202 aa 
Translation table11 
GC content39% 
IMG OID640085386 
Producttranslation initiation factor IF-3 
Protein accessionYP_001015910 
Protein GI124026795 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0290] Translation initiation factor 3 (IF-3) 
TIGRFAM ID[TIGR00168] translation initiation factor IF-3 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.240556 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.63143 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCAC GTCCCCGTTT TGATCGTCAC GCTCCAGAAA GGGAGTTGCC CAACATTAAT 
GAAAGAATCA GCTATTCAAG CTTAAGGGTT GTTGATTCTG ATGGCACTCA ACTTGGTGTC
ATCAGTCGAG AGGAAGCTCT AGAGGTCGCT AAAGAGAGAG AATTAGATCT TGTTTTGGTA
AGTGAGAAGG CCACTCCTCC TGTATGCCGG ATAATGAATT ATGGAAAATT CAAGTTTGAG
CAAGAAAAAA AAGCAAAGGA AGCTAAGAAA AAATCACACC AAACAGAAGT TAAAGAAGTA
AAAATGAGGT ATAAAATTGA CCAGCATGAT TATCAGGTCC GTATTAGTCA GGCCACGAGA
TTCTTAAAAG CTGGAGATAA AGTCAAATGC ACGGTTATAT TCAGAGGCCG CGAAATTCAA
CACACTGCTC TAGCAGAAAC TCTTCTAAAA AGAATGTCAA AGGATTTGGA AGAAAAGGCT
GAAGTACAAC AATCCCCTAA AAGAGAGGGA AGAAATATGA TTATGTTTTT AACTCCGCGT
AAAACTCCTC TTTTAAAGAA GGAGAGTGAA ACAACTGAAC CAAAAAAAGC TTTGAGATCA
ATTAATTAA
 
Protein sequence
MPPRPRFDRH APERELPNIN ERISYSSLRV VDSDGTQLGV ISREEALEVA KERELDLVLV 
SEKATPPVCR IMNYGKFKFE QEKKAKEAKK KSHQTEVKEV KMRYKIDQHD YQVRISQATR
FLKAGDKVKC TVIFRGREIQ HTALAETLLK RMSKDLEEKA EVQQSPKREG RNMIMFLTPR
KTPLLKKESE TTEPKKALRS IN