Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | NATL1_20441 |
Symbol | ho1 |
ID | 4779884 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Prochlorococcus marinus str. NATL1A |
Kingdom | Bacteria |
Replicon accession | NC_008819 |
Strand | - |
Start bp | 1686711 |
End bp | 1687418 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 34% |
IMG OID | 640085338 |
Product | Heme oxygenase |
Protein accession | YP_001015864 |
Protein GI | 124026749 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG5398] Heme oxygenase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.810996 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACTAG CCTTCGCTAG GCAACTTCGT GAAGGGACTA AAAAGTCTCA TACGATGGCT GAAAATACAG GTTTTATAAG TTGTTTCCTC AAGGGCGTAG TTGATAAGTC CTCATACAGA AATTTATTAG CTGATTTATA TTTTGTTTAC TCTGCGATGG AGGAAGAGAT AGAAAAACTT TGTGAAAATT CTCATCCGAT AATTTCTCCA ATTGGATTTA AAGAGCTTTT TCGTAAGAAA AAATTAGAGC AAGATTTGTC GTTCTACTTT GGTAGTAATT GGTCTGAATT GGTAAAACCC TCAAAGCCAG CTGTTGAATA TGAAGCAAGA ATTCGAGAAA TCGCGAAAGA TAATCCTGAA CTTTTAATTG GGCATCATTA CAGCCGATAT ATAGGTGACT TGTCTGGAGG ACAGCTTTTG AAAACAATTA CTAAAAAAGC CATGAATCTT CCTGGGGATG ATGGACTTAG CTTTTATATT TTTGAGGAAA TCAGCGATGA AAAAGAATTT AAGATTAAGT ATAGAAATAC CCTGGATAAT CTTCCTATTG ATCAAAAGAT AGCAGATTCA ATTATAGAAG AGGCCAATAG ATCTTTTAAA TATAATATGG ATATTTTTAA TGAATTAGAA GGAAATTTAA TTGCAGCAAT AGGGAAAGTT TTATTTAGAT TTTTTGCAAA TAAAAAGCGA AAAGGTAGCA CGGAGTAG
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Protein sequence | MALAFARQLR EGTKKSHTMA ENTGFISCFL KGVVDKSSYR NLLADLYFVY SAMEEEIEKL CENSHPIISP IGFKELFRKK KLEQDLSFYF GSNWSELVKP SKPAVEYEAR IREIAKDNPE LLIGHHYSRY IGDLSGGQLL KTITKKAMNL PGDDGLSFYI FEEISDEKEF KIKYRNTLDN LPIDQKIADS IIEEANRSFK YNMDIFNELE GNLIAAIGKV LFRFFANKKR KGSTE
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