Gene NATL1_20441 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20441 
Symbolho1 
ID4779884 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1686711 
End bp1687418 
Gene Length708 bp 
Protein Length235 aa 
Translation table11 
GC content34% 
IMG OID640085338 
ProductHeme oxygenase 
Protein accessionYP_001015864 
Protein GI124026749 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG5398] Heme oxygenase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.810996 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCACTAG CCTTCGCTAG GCAACTTCGT GAAGGGACTA AAAAGTCTCA TACGATGGCT 
GAAAATACAG GTTTTATAAG TTGTTTCCTC AAGGGCGTAG TTGATAAGTC CTCATACAGA
AATTTATTAG CTGATTTATA TTTTGTTTAC TCTGCGATGG AGGAAGAGAT AGAAAAACTT
TGTGAAAATT CTCATCCGAT AATTTCTCCA ATTGGATTTA AAGAGCTTTT TCGTAAGAAA
AAATTAGAGC AAGATTTGTC GTTCTACTTT GGTAGTAATT GGTCTGAATT GGTAAAACCC
TCAAAGCCAG CTGTTGAATA TGAAGCAAGA ATTCGAGAAA TCGCGAAAGA TAATCCTGAA
CTTTTAATTG GGCATCATTA CAGCCGATAT ATAGGTGACT TGTCTGGAGG ACAGCTTTTG
AAAACAATTA CTAAAAAAGC CATGAATCTT CCTGGGGATG ATGGACTTAG CTTTTATATT
TTTGAGGAAA TCAGCGATGA AAAAGAATTT AAGATTAAGT ATAGAAATAC CCTGGATAAT
CTTCCTATTG ATCAAAAGAT AGCAGATTCA ATTATAGAAG AGGCCAATAG ATCTTTTAAA
TATAATATGG ATATTTTTAA TGAATTAGAA GGAAATTTAA TTGCAGCAAT AGGGAAAGTT
TTATTTAGAT TTTTTGCAAA TAAAAAGCGA AAAGGTAGCA CGGAGTAG
 
Protein sequence
MALAFARQLR EGTKKSHTMA ENTGFISCFL KGVVDKSSYR NLLADLYFVY SAMEEEIEKL 
CENSHPIISP IGFKELFRKK KLEQDLSFYF GSNWSELVKP SKPAVEYEAR IREIAKDNPE
LLIGHHYSRY IGDLSGGQLL KTITKKAMNL PGDDGLSFYI FEEISDEKEF KIKYRNTLDN
LPIDQKIADS IIEEANRSFK YNMDIFNELE GNLIAAIGKV LFRFFANKKR KGSTE