Gene NATL1_20411 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20411 
Symbolwzb 
ID4779873 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1684545 
End bp1685018 
Gene Length474 bp 
Protein Length157 aa 
Translation table11 
GC content33% 
IMG OID640085335 
Productlow molecular weight phosphotyrosine protein phosphatase 
Protein accessionYP_001015861 
Protein GI124026746 
COG category[T] Signal transduction mechanisms 
COG ID[COG0394] Protein-tyrosine-phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAA AAATTCTCTT TGTTTGCTTG GGCAATATTT GTCGTTCGCC TGCCGCTGAA 
GGCATTTTTA ATCACAAAAT TAAAGAGAGA GATTTAGAAA AATTTTTTGT AGTTGATTCC
GCAGGAACAG GAAGTTGGCA TGTTGGAAAT CTTCCTGATA AAAGAATGCG AGCAACAGCT
TTATCAAGGG GGATAGAACT GACCAGTAGG TCGAGACAAA TCGAAGAAAA TGATTTATAT
GAATTTGATC AGATTCTTGT TATGGATAAA GATAATCTCG ATGCTGTTAA ATCATTAACT
AAAGATCAAA ATAATCCTGT AAATTCTAAA ATAAAGCTTA TTCTAAGTTA CTCAAAAAAC
TTTCAATTAG ATGAAGTCCC TGACCCTTAT TATGGTGGAC AAAATGGATT CGACAAAGTT
ATAGATTTAC TTGATGATGC TATGGATGGA TTAATAGATA GTCTCACGAA TTAG
 
Protein sequence
MVKKILFVCL GNICRSPAAE GIFNHKIKER DLEKFFVVDS AGTGSWHVGN LPDKRMRATA 
LSRGIELTSR SRQIEENDLY EFDQILVMDK DNLDAVKSLT KDQNNPVNSK IKLILSYSKN
FQLDEVPDPY YGGQNGFDKV IDLLDDAMDG LIDSLTN