Gene NATL1_20171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNATL1_20171 
Symbol 
ID4779560 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameProchlorococcus marinus str. NATL1A 
KingdomBacteria 
Replicon accessionNC_008819 
Strand
Start bp1660366 
End bp1661208 
Gene Length843 bp 
Protein Length280 aa 
Translation table11 
GC content35% 
IMG OID640085309 
ProductPP family ATPase 
Protein accessionYP_001015837 
Protein GI124026722 
COG category[R] General function prediction only 
COG ID[COG1606] ATP-utilizing enzymes of the PP-loop superfamily 
TIGRFAM ID[TIGR00268] conserved hypothetical protein TIGR00268 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.700007 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTTTTTTA GTCAACTTGA ATCTTTAACA GACTCAGAAC TAAAGCAATT AAAATTGTTA 
AGGGAGTTTA TTAAAGACAT AAATTATGTA TGTGTTGCTT TTTCTGGAGG CGTTGATAGT
TCTTTAGTAG CGACAATAGC CCATGAGCAA CTAGGTTCAA AAGCCTTTGC CGTTACTGGT
GTCTCTCCTT CTTTAGCTCC ATATTTGCTT AAGCAAGCGC GTCTTCAAGC AGACTGGATT
GGGATTCATC ATGAAGAATG CCAAACAAAT GAAATCAACC AACCAAATTA CTTTAAAAAT
CCTGACAATA GATGTTTTGC ATGCAAACAA GAATTACATA CACATTTAAC TGAAATTTCA
AAAAAATTCC ATAATGCTCA AGTCCTTGAT GGAGTGAACT ATGACGACCT TCACGACTAT
CGACCAGGCA TTCAAGCATC AAATCAGGCA GGAGTAATAT CACCTCTAGC TGAACTAGAA
ATAGATAAAA AATCAATTCG TTCAATTTCA AAATCATTAG GTTTACCCTG GTGGGATAAA
CCTGCACAAC CATGTTTAGC CTCTCGTATT CCTTTTGGAG AGGAAATAAG TTCAAAAAGG
CTTAAGCAGA TTGCGTTAGC AGAAGAATGG ATTATTAATC AAGGTTTTTC AAAAGTACGT
GTAAGAAGTC AAGGCCTATC AGCCAGAATC GAATTACCAG CAAATGAAAT AAATAACTTT
CTTAAAATCG TTGAAAGAAA TAAATTAATT AAATATTTTT TATCTTTAGG TTTCCATTCT
ATAAGTCTAG ATCTTGAGGG TTTGATTAGT GGAAAACTCA CAAGAGATAT AAAGACTACT
TAG
 
Protein sequence
MFFSQLESLT DSELKQLKLL REFIKDINYV CVAFSGGVDS SLVATIAHEQ LGSKAFAVTG 
VSPSLAPYLL KQARLQADWI GIHHEECQTN EINQPNYFKN PDNRCFACKQ ELHTHLTEIS
KKFHNAQVLD GVNYDDLHDY RPGIQASNQA GVISPLAELE IDKKSIRSIS KSLGLPWWDK
PAQPCLASRI PFGEEISSKR LKQIALAEEW IINQGFSKVR VRSQGLSARI ELPANEINNF
LKIVERNKLI KYFLSLGFHS ISLDLEGLIS GKLTRDIKTT